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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1sxjC_

Fold library idPDB HeaderMoleculeTitle
c1sxjC_PDB header: replicationChain: C: PDB Molecule: activator 1 40 kda subunit;PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)


Added to library: Tue Mar 16 13:40:58 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLE
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Known secondary structure (DSSP)


T

SSGGG

S
TT




SSSSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAH
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Known secondary structure (DSSP)
TTS

STS

SSS
S
TTGGGS
TTTTS
GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDN
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Known secondary structure (DSSP) GS
TTS




TTT

B
TT
TTTTTTTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQ
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Known secondary structure (DSSP) SS


B
TT


TS
TTT

TTS

S
 .........290.........300.........310.........320..
Sequence NEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGAIKASFEN
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Known secondary structure (DSSP) STT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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