PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1l8qa2

Fold library id	Fold	Superfamily	Family
d1l8qa2	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	Extended AAA-ATPase domain

Links to external resources
Added to library: Tue Mar 16 13:04:17 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D F L N P K Y T L E N F I V G E G N R L A Y E V V K E A L E N L G S L Y N P I F I Y G S V G T G K T H L L Q A A G N E A K K R G Y R V I Y S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S
T T T T T T T S
S S
S S S S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S A D D F A Q A X V E H L K K G T I N E F R N X Y K S V D L L L L D D V Q F L S G K E R T Q I E F F H I F N T L Y L L E K Q I I L A S D R H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T
S
G G G G T T
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P Q K L D G V S D R L V S R F E G G I L V E I E L D N K T R F K I I K E K L K E F N L E L R K E V I D Y L L E N T K N V R E I E G K I K L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
T T S
T S
T T
S S

. . .

Sequence K L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	F	L	N	P	K	Y	T	L	E	N	F	I	V	G	E	G	N	R	L	A	Y	E	V	V	K	E	A	L	E	N	L	G	S	L	Y	N	P	I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	R	G	Y	R	V	I	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T			S	S	S					T	T	T													T	T	T	T	S		S	S						S	S	S	S	S															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	A	D	D	F	A	Q	A	X	V	E	H	L	K	K	G	T	I	N	E	F	R	N	X	Y	K	S	V	D	L	L	L	L	D	D	V	Q	F	L	S	G	K	E	R	T	Q	I	E	F	F	H	I	F	N	T	L	Y	L	L	E	K	Q	I	I	L	A	S	D	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T											T		S							G	G	G	G	T	T																		T	T								S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	Q	K	L	D	G	V	S	D	R	L	V	S	R	F	E	G	G	I	L	V	E	I	E	L	D	N	K	T	R	F	K	I	I	K	E	K	L	K	E	F	N	L	E	L	R	K	E	V	I	D	Y	L	L	E	N	T	K	N	V	R	E	I	E	G	K	I	K	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		T	T	S										T	S																							T	T																S	S
	.	.	.
Sequence	K	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)