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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b4tL_

Fold library idPDB HeaderMoleculeTitle
c4b4tL_PDB header: hydrolaseChain: L: PDB Molecule: 26s protease subunit rpt4;PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome


Added to library: Sat Sep 8 15:21:23 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVD
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Known secondary structure (DSSP)
S



SSSS
TTS

B
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEI
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Known secondary structure (DSSP) TTS

TT

SSS
S



S



SS
S
SS
SGGG
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence FQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPC
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Known secondary structure (DSSP)





S
TTSST
GGGT

SSSSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRK
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Known secondary structure (DSSP)


SSS


SSS

SSTTSSS
TTSSSSTTSS
TTTTSTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLM
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Known secondary structure (DSSP)





TS
B
S


T

S

TT
SSB
 .........360.
Sequence KAVRKVAEVKK
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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