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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4b4tJ_

Fold library idPDB HeaderMoleculeTitle
c4b4tJ_PDB header: hydrolaseChain: J: PDB Molecule: 26s protease regulatory subunit 8 homolog;PDBTitle: near-atomic resolution structural model of the yeast 26s proteasome


Added to library: Sat Sep 8 15:23:24 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGK
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Known secondary structure (DSSP)






TTS
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEV
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Known secondary structure (DSSP)


TTS
TTT

SS
TTT
S






S

TTS

S
S

GGGS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVREL
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Known secondary structure (DSSP) T
T





S
SSSST
GGGGS
SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPA
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Known secondary structure (DSSP) T
SSSS

TTS
S
SSSGGGGTTT



S
SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRER
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Known secondary structure (DSSP) STTSS






TTSB

SS



S

TT
 .........360.........370...
Sequence RIHVTQEDFELAVGKVMNKNQET
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Known secondary structure (DSSP)
SB

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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