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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4d2qC_

Fold library idPDB HeaderMoleculeTitle
c4d2qC_PDB header: chaperoneChain: C: PDB Molecule: clpb;PDBTitle: negative-stain electron microscopy of e. coli clpb2 mutant e432a (bap form bound to clpp)


Added to library: Sat Jun 7 08:34:56 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LDRLTNKFQLALADAQSLALGHDNQFIEPLHLXSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLP
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Known secondary structure (DSSP)
TTB
TT
S



TT
STT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQQALKKYT
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Known secondary structure (DSSP) SSS

STT
SSB
STS
TS






STTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGR
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Known secondary structure (DSSP) TT
S



S
TTT
SSS



TTSSTTTTT
S
GGGTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RVLALDXGALRLKGVLNDLAKQEGNVILFIDELHTXVGADAGNXLKPALARGELHCVGATTLDEYRQYIE
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Known secondary structure (DSSP)
TTS
S

TTS
SSTTTTTTTSS

TTTTSS



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLI
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Known secondary structure (DSSP) S
TT





TS
ST

SS
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DEAASSIRXQIDSKPEELDRLDRRIIQLKLEQQALXKRLDXLNEELSDKERQYSELEEEWKAEKASLSGT
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Known secondary structure (DSSP) TTS
BTTBTSSS
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence QTIKAELEQAKIAIEQARRXSELQYGKIPELEKQLEAATQLEGKTXRLLRNKVTDAEIAEVLARWTGIPV
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Known secondary structure (DSSP) TTSS

SSTTSBTTBTTTTTTT


SS


TTS



 .........500.........510.........520.........530.........540.........550.........560
Sequence SRXXESEREKLLRXEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKAL
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Known secondary structure (DSSP) TTT

SST
TT

S
TT
S
TTS
S
S
TTSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence ANFXFDSDEAXVRIDXSEFXEKHSVSRLVGAGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDG
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Known secondary structure (DSSP) SSSSSS

TTTT
SGGGGGGTTTSS
SS
S



TTSS
TS
 .........640.........650.........660.........670.........680.........690.........700
Sequence RLTDGQGRTVDFRNTVVIXTSNLGSDLIQERFLDYAHXKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQ
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Known secondary structure (DSSP)

TTS


TT


ST


STTTTTS
TT
S





 .........710.........720.........730.........740.........750.........760.........770
Sequence HIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV
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Known secondary structure (DSSP) SSS

T

TTT
STTTSTSS
 .........780.........
Sequence PGKVIRLEVNEDRIVAVQH
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Known secondary structure (DSSP) TTS
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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