PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2v1uA_

Fold library id	PDB Header	Molecule	Title
c2v1uA_	PDB header: replication	Chain: A: PDB Molecule: cell division control protein 6 homolog;	PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna

Links to external resources
Added to library: Tue Mar 16 12:11:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L E S K I F R K R W V L L P D Y V P D V L P H R E A E L R R L A E V L A P A L R G E K P S N A L L Y G L T G T G K T A V A R L V L R R L E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B S
S T T
S
T T
T T G G G T S S
B
T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R A S S L G V L V K P I Y V N A R H R E T P Y R V A S A I A E A V G V R V P F T G L S V G E V Y E R L V K R L S R L R G I Y I I V L D E I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T S
S S
S S
T T S
S T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F L P K R P G G Q D L L Y R I T R I N Q E L V S L V G I T N S L G F V E N L E P R V K S S L G E V E L V F P P Y T A P Q L R D I L E T R A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T G G G
S
S T T S S S S
T T T T S
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence E A F N P G V L D P D V V P L C A A L A A R E H G D A R R A L D L L R V A G E I A E R R R E E R V R R E H V Y S A R A E I E R D R V S E V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
T T T B
S S S S S
T T
S
B

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence R T L P L H A K L V L L S I M M L E D G G R P A S T G E I Y E R Y K E L T S T L G L E H V T L R R V S G I I S E L D M L G I V K S R V V S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S S S
T T
T T S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . .

Sequence G R Y G K T R E V S L D A D R L A V E N A L S E D P F V A R L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S
S T T G G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	E	S	K	I	F	R	K	R	W	V	L	L	P	D	Y	V	P	D	V	L	P	H	R	E	A	E	L	R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	B	S						S	T	T				S			T	T											T	T	G	G	G	T	S	S										B		T	T	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H	R	E	T	P	Y	R	V	A	S	A	I	A	E	A	V	G	V	R	V	P	F	T	G	L	S	V	G	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I	Y	I	I	V	L	D	E	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T										T	T	T	S		S													S					S	S																T	T	S		S								T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	L	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	I	N	Q	E	L	V	S	L	V	G	I	T	N	S	L	G	F	V	E	N	L	E	P	R	V	K	S	S	L	G	E	V	E	L	V	F	P	P	Y	T	A	P	Q	L	R	D	I	L	E	T	R	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T											G	G	G										S		S	T	T	S	S	S	S						T	T	T	T	S					B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	A	F	N	P	G	V	L	D	P	D	V	V	P	L	C	A	A	L	A	A	R	E	H	G	D	A	R	R	A	L	D	L	L	R	V	A	G	E	I	A	E	R	R	R	E	E	R	V	R	R	E	H	V	Y	S	A	R	A	E	I	E	R	D	R	V	S	E	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		T	T	T	B		S	S											S	S	S																				T	T		S		B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	T	L	P	L	H	A	K	L	V	L	L	S	I	M	M	L	E	D	G	G	R	P	A	S	T	G	E	I	Y	E	R	Y	K	E	L	T	S	T	L	G	L	E	H	V	T	L	R	R	V	S	G	I	I	S	E	L	D	M	L	G	I	V	K	S	R	V	V	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S															S	S	S	S																			T	T																			T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Sequence	G	R	Y	G	K	T	R	E	V	S	L	D	A	D	R	L	A	V	E	N	A	L	S	E	D	P	F	V	A	R	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G										S												S	T	T	G	G	G	G