Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3vfdA_

Fold library idPDB HeaderMoleculeTitle
c3vfdA_PDB header: hydrolaseChain: A: PDB Molecule: spastin;PDBTitle: human spastin aaa domain


Added to library: Sat Jun 2 12:42:01 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAK
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

TTGGGTTB

S



GGGS
S
T
TTTS
GGG


SSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AVAAESNATFFNISAASLGEKLVRALFAVARELQPSIIFIDQVDSLLDASRRLKTEFLIEFDGVQRVLVM
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) TT

S



SSSTGGGG

T

 .........150.........160.........170.........180.........190.........200.........210
Sequence GATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S
GGG

TT






TTS


S
TTT

 .........220.........230.........240.........250.........260......
Sequence KDAALGPIRELKPENMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG
Predicted secondary structure















SS confidence























































Known secondary structure (DSSP) TTTS




SSS








SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D