Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ9Y7Z8
DateSun Jul 8 12:04:58 BST 2012
Unique Job ID0d87b2125ba9b95e

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3j04A_
Top template information
PDB header:structural protein
Chain: A: PDB Molecule:myosin-11;
PDBTitle: em structure of the heavy meromyosin subfragment of chick smooth2 muscle myosin with regulatory light chain in phosphorylated state
Confidence and coverage
Confidence:100.0% Coverage: 64%
777 residues ( 64% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
833 residues ( 68%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MAILKRTNRAKAATAAAPNSTGKSNGIKKAVYTSTRKKTVGVDDLTLLSKITDEEINKNL
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Disorder  ???????????????????
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   .........70.........80.........90.........100.........110.........120
Sequence  ELRFRNGEIYTYIGHVLISVNPFRDLGIYTMDILKSYQGKNRLETSPHVYAIAENAYYQM
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???????














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   .........130.........140.........150.........160.........170.........180
Sequence  KSYHENQCIIISGESGAGKTEAAKRIMQYITHVSKSVGTEIERVSEIILATNPLLESFGC
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   .........190.........200.........210.........220.........230.........240
Sequence  AKTLRNNNSSRHGKYLEMIFNSGGVPVGAKITNYLLEKNRIVNQVRNERNFHIFYQFTKS
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   .........250.........260.........270.........280.........290.........300
Sequence  APQKYRDTYGIQGPENYVYTSACQCLSVDGISDEKDFQGTMNAMKVIGITEPEQDEIFRM
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   .........310.........320.........330.........340.........350.........360
Sequence  LSIILWLGNIQFQEGQDGGSVISDKSITEFLGYLIGVPVAAIERALTIRIMQTQHGARRG
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   .........370.........380.........390.........400.........410.........420
Sequence  SVYEVPLNPTQALAVRDALSMAIYNCLFDWIVERVNKALVTSDNSVSNSIGILDIYGFEI
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   .........430.........440.........450.........460.........470.........480
Sequence  FENNSFEQLCINYVNEKLQQIFIELTLKTEQEEYVREQIAWTPIKYFNNKVVCDLIESKR
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   .........490.........500.........510.........520.........530.........540
Sequence  PPGLFAAMNDAIATAHADSAAADSAFAQRLNFLSSNPHFEQRQNQFIVKHYAGDVTYSIT
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   .........550.........560.........570.........580.........590.........600
Sequence  GMTDKNKDQLATDILNLIHSSNNEFMKSIFPVAEESNSRRRPPTAGDRIKTSANDLVETL
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   .........610.........620.........630.........640.........650.........660
Sequence  MKCQPSYIRTIKPNQTKSPNDYDQQMVLHQIKYLGLQENIRIRRAGFAYRQAFDTFAQRF
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   .........670.........680.........690.........700.........710.........720
Sequence  AVLSGKTSYAGEYTWQGDDKSACEQILKDTNIPSSEYQMGTSKVFIKNPETLFALEDMRD
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   .........730.........740.........750.........760.........770.........780
Sequence  KFWDTMATRIQRAWRSYVRRRSEAAACIQKLWNRNKVNMELERVRNEGTKLLQGKKQRRR
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   .........790.........800.........810.........820.........830.........840
Sequence  YSILGSRKFYGDYLSASKPNGTLWNTCGLSQNDHVIFSMRCEVLVHKLGRTSKPSPRQLV
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   .........850.........860.........870.........880.........890.........900
Sequence  LTKKNLYLVITKIVDQKLTQQVEKKFAVSSIDSVGLTNLQDDWVAIRNKSSQNGDMFLRC
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   .........910.........920.........930.........940.........950.........960
Sequence  FFKTEFITTLKRINRNIQVIVGPTIQYCRKPGKVQTVKTAKDETTKDYDYYKSGTIHVGT
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Disorder  ?









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   .........970.........980.........990.........1000.........1010.........1020
Sequence  GLPPTSKSKPFPRLATGGSTAAARGPRPVVQNKPAATKPVSMPAAKSKPAPMANPVSTAQ
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Disorder  ????????????????????????????????????????????????????????????
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  QTQNRPPAPAMQARPNTTQAAAPVTSTTTTIKQATTVSASKPAPSTVTSAASSPSNISKP
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Disorder  ????????????????????????????????????????????????????????????
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  SAPVANNVSKPSAVPPPPPPPPAEVEKKDLYLALYDFAGRSPNEMTIKKDEIIEIVQKEP
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Disorder  ????????????????????????????????????
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?
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  SGWWLALKNGAEGWVPATYVTEYKGSTPQTTASSTNVAAQANNNASPAEVNNLAGSLADA
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??

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   .........1210.......
Sequence  LRMRASAVRGSDEEEDW
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Disorder 




????????????
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3j04 chain A

3D model

Region: 28 - 825
Aligned: 777
Modelled: 798
Confidence: 100.0%
Identity: 34%
PDB header:structural protein
Chain: A: PDB Molecule:myosin-11;
PDBTitle: em structure of the heavy meromyosin subfragment of chick smooth2 muscle myosin with regulatory light chain in phosphorylated state

Phyre2

PDB 1i84 chain V

3D model

Region: 31 - 827
Aligned: 774
Modelled: 793
Confidence: 100.0%
Identity: 34%
PDB header:contractile protein
Chain: V: PDB Molecule:smooth muscle myosin heavy chain;
PDBTitle: cryo-em structure of the heavy meromyosin subfragment of2 chicken gizzard smooth muscle myosin with regulatory light3 chain in the dephosphorylated state. only c alphas4 provided for regulatory light chain. only backbone atoms5 provided for s2 fragment.

Phyre2

PDB 2bki chain A

3D model

Region: 2 - 760
Aligned: 740
Modelled: 759
Confidence: 100.0%
Identity: 33%
PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2-iq) crystal structure

Phyre2

PDB 2otg chain A

3D model

Region: 31 - 768
Aligned: 705
Modelled: 736
Confidence: 100.0%
Identity: 35%
PDB header:contractile protein
Chain: A: PDB Molecule:myosin heavy chain;
PDBTitle: rigor-like structures of muscle myosins reveal key2 mechanical elements in the transduction pathways of this3 allosteric motor

Phyre2

PDB 2bkh chain A

3D model

Region: 2 - 759
Aligned: 728
Modelled: 748
Confidence: 100.0%
Identity: 33%
PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2) crystal structure

Phyre2

PDB 2ycu chain A

3D model

Region: 31 - 839
Aligned: 793
Modelled: 809
Confidence: 100.0%
Identity: 32%
PDB header:motor protein
Chain: A: PDB Molecule:non muscle myosin 2c, alpha-actinin;
PDBTitle: crystal structure of human non muscle myosin 2c in pre-power stroke2 state

Phyre2

PDB 1br4 chain E

3D model

Region: 31 - 749
Aligned: 696
Modelled: 719
Confidence: 100.0%
Identity: 36%
PDB header:muscle protein
Chain: E: PDB Molecule:myosin;
PDBTitle: smooth muscle myosin motor domain-essential light chain2 complex with mgadp.bef3 bound at the active site

Phyre2

PDB 2dfs chain A

3D model

Region: 28 - 828
Aligned: 767
Modelled: 801
Confidence: 100.0%
Identity: 36%
PDB header:contractile protein/transport protein
Chain: A: PDB Molecule:myosin-5a;
PDBTitle: 3-d structure of myosin-v inhibited state

Phyre2

PDB 3dtp chain A

3D model

Region: 31 - 867
Aligned: 814
Modelled: 837
Confidence: 100.0%
Identity: 33%
PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map

Phyre2

PDB 1g8x chain B

3D model

Region: 2 - 827
Aligned: 807
Modelled: 826
Confidence: 100.0%
Identity: 32%
PDB header:structural protein
Chain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3;
PDBTitle: structure of a genetically engineered molecular motor

Phyre2

PDB 1oe9 chain A

3D model

Region: 3 - 749
Aligned: 699
Modelled: 737
Confidence: 100.0%
Identity: 37%
PDB header:atpase/myosin
Chain: A: PDB Molecule:myosin va;
PDBTitle: crystal structure of myosin v motor with essential light2 chain - nucleotide-free

Phyre2

PDB 1kk8 chain A domain 2

3D model

Region: 35 - 769
Aligned: 692
Modelled: 735
Confidence: 100.0%
Identity: 35%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2

PDB 1d0x chain A domain 2

3D model

Region: 22 - 720
Aligned: 669
Modelled: 697
Confidence: 100.0%
Identity: 37%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2

PDB 1w7j chain A domain 2

3D model

Region: 35 - 747
Aligned: 681
Modelled: 711
Confidence: 100.0%
Identity: 39%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2

PDB 2vb6 chain A

3D model

Region: 2 - 758
Aligned: 688
Modelled: 740
Confidence: 100.0%
Identity: 34%
PDB header:motor protein
Chain: A: PDB Molecule:myosin vi;
PDBTitle: myosin vi (md-insert2-cam, delta insert1) post-rigor state (2 crystal form 2)

Phyre2

PDB 1w8j chain D

3D model

Region: 1 - 722
Aligned: 688
Modelled: 708
Confidence: 100.0%
Identity: 38%
PDB header:motor protein
Chain: D: PDB Molecule:myosin va;
PDBTitle: crystal structure of myosin v motor domain -2 nucleotide-free

Phyre2

PDB 1w9i chain A

3D model

Region: 31 - 715
Aligned: 628
Modelled: 644
Confidence: 100.0%
Identity: 38%
PDB header:myosin
Chain: A: PDB Molecule:myosin ii heavy chain;
PDBTitle: myosin ii dictyostelium discoideum motor domain s456y bound2 with mgadp-befx

Phyre2

PDB 1lkx chain A

3D model

Region: 41 - 719
Aligned: 638
Modelled: 679
Confidence: 100.0%
Identity: 47%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2

PDB 1br2 chain C

3D model

Region: 31 - 720
Aligned: 635
Modelled: 675
Confidence: 100.0%
Identity: 38%
PDB header:muscle protein
Chain: C: PDB Molecule:myosin;
PDBTitle: smooth muscle myosin motor domain complexed with mgadp.alf4

Phyre2

PDB 1br2 chain A domain 2

3D model

Region: 36 - 720
Aligned: 630
Modelled: 670
Confidence: 100.0%
Identity: 39%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2
1

c3j04A_
2

c1i84V_
3

c2bkiA_
4

c2otgA_
5

c2bkhA_
6

c2ycuA_
7

c1br4E_
8

c2dfsA_
9

c3dtpA_
10

c1g8xB_
11

c1oe9A_
12

d1kk8a2
13

d1d0xa2
14

d1w7ja2
15

c2vb6A_
16

c1w8jD_
17

c1w9iA_
18

d1lkxa_
19

c1br2C_
20

d1br2a2
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3j04A_



100.0 34 PDB header:structural protein
Chain: A: PDB Molecule:myosin-11;
PDBTitle: em structure of the heavy meromyosin subfragment of chick smooth2 muscle myosin with regulatory light chain in phosphorylated state
2c1i84V_



100.0 34 PDB header:contractile protein
Chain: V: PDB Molecule:smooth muscle myosin heavy chain;
PDBTitle: cryo-em structure of the heavy meromyosin subfragment of2 chicken gizzard smooth muscle myosin with regulatory light3 chain in the dephosphorylated state. only c alphas4 provided for regulatory light chain. only backbone atoms5 provided for s2 fragment.
3c2bkiA_



100.0 33 PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2-iq) crystal structure
4c2otgA_



100.0 35 PDB header:contractile protein
Chain: A: PDB Molecule:myosin heavy chain;
PDBTitle: rigor-like structures of muscle myosins reveal key2 mechanical elements in the transduction pathways of this3 allosteric motor
5c2bkhA_



100.0 33 PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2) crystal structure
6c2ycuA_



100.0 32 PDB header:motor protein
Chain: A: PDB Molecule:non muscle myosin 2c, alpha-actinin;
PDBTitle: crystal structure of human non muscle myosin 2c in pre-power stroke2 state
7c1br4E_



100.0 36 PDB header:muscle protein
Chain: E: PDB Molecule:myosin;
PDBTitle: smooth muscle myosin motor domain-essential light chain2 complex with mgadp.bef3 bound at the active site
8c2dfsA_



100.0 36 PDB header:contractile protein/transport protein
Chain: A: PDB Molecule:myosin-5a;
PDBTitle: 3-d structure of myosin-v inhibited state
9c3dtpA_



100.0 33 PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
10c1g8xB_



100.0 32 PDB header:structural protein
Chain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3;
PDBTitle: structure of a genetically engineered molecular motor
11c1oe9A_



100.0 37 PDB header:atpase/myosin
Chain: A: PDB Molecule:myosin va;
PDBTitle: crystal structure of myosin v motor with essential light2 chain - nucleotide-free
12d1kk8a2



100.0 35 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
13d1d0xa2



100.0 37 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
14d1w7ja2



100.0 39 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
15c2vb6A_



100.0 34 PDB header:motor protein
Chain: A: PDB Molecule:myosin vi;
PDBTitle: myosin vi (md-insert2-cam, delta insert1) post-rigor state (2 crystal form 2)
16c1w8jD_



100.0 38 PDB header:motor protein
Chain: D: PDB Molecule:myosin va;
PDBTitle: crystal structure of myosin v motor domain -2 nucleotide-free
17c1w9iA_



100.0 38 PDB header:myosin
Chain: A: PDB Molecule:myosin ii heavy chain;
PDBTitle: myosin ii dictyostelium discoideum motor domain s456y bound2 with mgadp-befx
18d1lkxa_



100.0 47 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
19c1br2C_



100.0 38 PDB header:muscle protein
Chain: C: PDB Molecule:myosin;
PDBTitle: smooth muscle myosin motor domain complexed with mgadp.alf4
20d1br2a2



100.0 39 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
21c1o1aP_



not modelled 100.0 32 PDB header:contractile protein
Chain: P: PDB Molecule:skeletal muscle myosin ii;
PDBTitle: molecular models of averaged rigor crossbridges from2 tomograms of insect flight muscle
22d2mysa2



not modelled 100.0 33 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
23d1mnda2



not modelled 100.0 38 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
24c2ix7C_



not modelled 98.0 18 PDB header:contractile protein/metal binding
Chain: C: PDB Molecule:myosin-5a;
PDBTitle: structure of apo-calmodulin bound to unconventional myosin2 v
25d1iqpa2



not modelled 96.8 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
26c2chgB_



not modelled 96.7 16 PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
27d1sxjb2



not modelled 96.5 20 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
28c1sxjB_



not modelled 96.3 20 PDB header:replication
Chain: B: PDB Molecule:activator 1 37 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
29d1r6bx2



not modelled 96.1 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
30d1njfa_



not modelled 96.1 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
31c1sxjD_



not modelled 96.1 18 PDB header:replication
Chain: D: PDB Molecule:activator 1 41 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
32d1m7ga_



not modelled 96.0 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Adenosine-5'phosphosulfate kinase (APS kinase)
33d1sxjc2



not modelled 96.0 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
34d1vmaa2



not modelled 96.0 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
35c1sxjC_



not modelled 95.9 16 PDB header:replication
Chain: C: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
36c2chvE_



not modelled 95.8 18 PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
37d1okkd2



not modelled 95.8 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
38d1qzxa3



not modelled 95.8 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
39d2qy9a2



not modelled 95.8 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
40d1ki9a_



not modelled 95.7 23 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
41c2z4rB_



not modelled 95.7 26 PDB header:dna binding protein
Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa
42d1ixsb2



not modelled 95.6 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
43c1iqpF_



not modelled 95.6 14 PDB header:replication
Chain: F: PDB Molecule:rfcs;
PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus
44d1a5ta2



not modelled 95.6 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
45c3bosA_



not modelled 95.5 18 PDB header:hydrolase regulator,dna binding protein
Chain: A: PDB Molecule:putative dna replication factor;
PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
46d1ye8a1



not modelled 95.5 50 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
47c3uieB_



not modelled 95.5 25 PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:adenylyl-sulfate kinase 1, chloroplastic;
PDBTitle: crystal structure of adenosine 5'-phosphosulfate kinase from2 arabidopsis thaliana in complex with amppnp and aps
48c2gksB_



not modelled 95.4 21 PDB header:transferase
Chain: B: PDB Molecule:bifunctional sat/aps kinase;
PDBTitle: crystal structure of the bi-functional atp sulfurylase-aps kinase from2 aquifex aeolicus, a chemolithotrophic thermophile
49c2yvuA_



not modelled 95.4 26 PDB header:transferase
Chain: A: PDB Molecule:probable adenylyl-sulfate kinase;
PDBTitle: crystal structure of ape1195
50c2qbyB_



not modelled 95.3 23 PDB header:replication/dna
Chain: B: PDB Molecule:cell division control protein 6 homolog 3;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
51d1sxjd2



not modelled 95.3 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
52c1xxhB_



not modelled 95.2 12 PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
53c1sxjA_



not modelled 95.2 18 PDB header:replication
Chain: A: PDB Molecule:activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
54c2jatA_



not modelled 95.2 36 PDB header:transferase
Chain: A: PDB Molecule:deoxyguanosine kinase;
PDBTitle: structure of deoxyadenosine kinase from m.mycoides with2 products dcmp and a flexible dcdp bound
55c2z0hA_



not modelled 95.2 32 PDB header:transferase
Chain: A: PDB Molecule:thymidylate kinase;
PDBTitle: crystal structure of thymidylate kinase in complex with dtdp2 and adp from thermotoga maritima
56d2bdta1



not modelled 95.1 36 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Atu3015-like
57c4dwjB_



not modelled 95.1 24 PDB header:transferase
Chain: B: PDB Molecule:thymidylate kinase;
PDBTitle: crystal structure of thymidylate kinase from staphylococcus aureus in2 complex with thymidine monophosphate
58d1l8qa2



not modelled 95.1 20 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
59c3pvsA_



not modelled 95.1 26 PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
60d1m7gb_



not modelled 95.1 22 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Adenosine-5'phosphosulfate kinase (APS kinase)
61c2p65A_



not modelled 95.1 20 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pf08_0063;
PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
62d1ofha_



not modelled 95.0 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
63d1khta_



not modelled 95.0 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
64d1jbka_



not modelled 95.0 25 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
65d1ls1a2



not modelled 94.9 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
66c1sxjE_



not modelled 94.9 14 PDB header:replication
Chain: E: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
67c2w0sB_



not modelled 94.9 36 PDB header:transferase
Chain: B: PDB Molecule:thymidylate kinase;
PDBTitle: crystal structure of vaccinia virus thymidylate kinase2 bound to brivudin-5'-monophosphate
68d1qhxa_



not modelled 94.9 28 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Chloramphenicol phosphotransferase
69c3u5zM_



not modelled 94.9 19 PDB header:dna binding protein/dna
Chain: M: PDB Molecule:dna polymerase accessory protein 44;
PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog
70c3te6A_



not modelled 94.8 10 PDB header:gene regulation
Chain: A: PDB Molecule:regulatory protein sir3;
PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
71d1rz3a_



not modelled 94.8 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
72c2bwjC_



not modelled 94.8 23 PDB header:transferase
Chain: C: PDB Molecule:adenylate kinase 5;
PDBTitle: structure of adenylate kinase 5
73d2i3ba1



not modelled 94.8 20 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
74d1rkba_



not modelled 94.8 32 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
75d1lv7a_



not modelled 94.8 19 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
76c3hdtB_



not modelled 94.8 26 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative kinase;
PDBTitle: crystal structure of putative kinase from clostridium symbiosum atcc2 14940
77c2plrB_



not modelled 94.8 32 PDB header:transferase
Chain: B: PDB Molecule:probable thymidylate kinase;
PDBTitle: crystal structure of dtmp kinase (st1543) from sulfolobus tokodaii2 strain7
78d1in4a2



not modelled 94.8 26 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
79c2grjH_



not modelled 94.7 23 PDB header:transferase
Chain: H: PDB Molecule:dephospho-coa kinase;
PDBTitle: crystal structure of dephospho-coa kinase (ec 2.7.1.24)2 (dephosphocoenzyme a kinase) (tm1387) from thermotoga maritima at3 2.60 a resolution
80d1fnna2



not modelled 94.7 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
81d1knqa_



not modelled 94.6 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Gluconate kinase
82c2ccjA_



not modelled 94.6 27 PDB header:transferase
Chain: A: PDB Molecule:thymidylate kinase;
PDBTitle: crystal structure of s. aureus thymidylate kinase complexed2 with thymidine monophosphate
83c3ch4B_



not modelled 94.6 18 PDB header:transferase
Chain: B: PDB Molecule:phosphomevalonate kinase;
PDBTitle: the crystal structure of human phosphomavelonate kinase at2 1.8 a resolution
84d1nksa_



not modelled 94.6 23 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
85d1sxja2



not modelled 94.6 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
86c3vaaC_



not modelled 94.6 36 PDB header:transferase
Chain: C: PDB Molecule:shikimate kinase;
PDBTitle: 1.7 angstrom resolution crystal structure of shikimate kinase from2 bacteroides thetaiotaomicron
87d1e6ca_



not modelled 94.6 23 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Shikimate kinase (AroK)
88c1ueiB_



not modelled 94.5 31 PDB header:transferase
Chain: B: PDB Molecule:uridine-cytidine kinase 2;
PDBTitle: crystal structure of human uridine-cytidine kinase 22 complexed with a feedback-inhibitor, utp
89d1odfa_



not modelled 94.5 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
90d1kaga_



not modelled 94.5 31 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Shikimate kinase (AroK)
91c2v1uA_



not modelled 94.4 17 PDB header:replication
Chain: A: PDB Molecule:cell division control protein 6 homolog;
PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
92c3tqcB_



not modelled 94.4 19 PDB header:transferase
Chain: B: PDB Molecule:pantothenate kinase;
PDBTitle: structure of the pantothenate kinase (coaa) from coxiella burnetii
93c3kx2A_



not modelled 94.4 29 PDB header:hydrolase
Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna
PDBTitle: crystal structure of prp43p in complex with adp
94c1m8pB_



not modelled 94.4 18 PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylyltransferase;
PDBTitle: crystal structure of p. chrysogenum atp sulfurylase in the t-state
95d1tmka_



not modelled 94.4 22 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
96c1v8jA_



not modelled 94.3 26 PDB header:structural protein
Chain: A: PDB Molecule:kinesin-like protein kif2c;
PDBTitle: the crystal structure of the minimal functional domain of2 the microtubule destabilizer kif2c complexed with mg-adp
97d1g41a_



not modelled 94.3 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
98d1m8pa3



not modelled 94.3 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ATP sulfurylase C-terminal domain
99c2vliB_



not modelled 94.3 31 PDB header:transferase
Chain: B: PDB Molecule:antibiotic resistance protein;
PDBTitle: structure of deinococcus radiodurans tunicamycin resistance2 protein
100d1x6va3



not modelled 94.3 29 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Adenosine-5'phosphosulfate kinase (APS kinase)
101d1sxje2



not modelled 94.3 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
102c2hcbC_



not modelled 94.3 20 PDB header:replication
Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus
103c3fdiA_



not modelled 94.3 32 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein from eubacterium2 ventriosum atcc 27560.
104c2ql6H_



not modelled 94.3 41 PDB header:signaling protein,transferase
Chain: H: PDB Molecule:nicotinamide riboside kinase 1;
PDBTitle: human nicotinamide riboside kinase (nrk1)
105d2cdna1



not modelled 94.3 27 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
106c2wwiC_



not modelled 94.2 27 PDB header:transferase
Chain: C: PDB Molecule:thymidilate kinase, putative;
PDBTitle: plasmodium falciparum thymidylate kinase in complex with2 aztmp and adp
107d3adka_



not modelled 94.2 26 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
108c3akcA_



not modelled 94.2 32 PDB header:transferase
Chain: A: PDB Molecule:cytidylate kinase;
PDBTitle: crystal structure of cmp kinase in complex with cdp and adp from2 thermus thermophilus hb8
109c3cm0A_



not modelled 94.2 42 PDB header:transferase
Chain: A: PDB Molecule:adenylate kinase;
PDBTitle: crystal structure of adenylate kinase from thermus2 thermophilus hb8
110c3lv8A_



not modelled 94.2 36 PDB header:transferase
Chain: A: PDB Molecule:thymidylate kinase;
PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp
111c3t61A_



not modelled 94.2 25 PDB header:transferase
Chain: A: PDB Molecule:gluconokinase;
PDBTitle: crystal structure of a gluconokinase from sinorhizobium meliloti 1021
112c2j41A_



not modelled 94.2 40 PDB header:transferase
Chain: A: PDB Molecule:guanylate kinase;
PDBTitle: crystal structure of staphylococcus aureus guanylate2 monophosphate kinase
113d1e4va1



not modelled 94.2 41 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
114d1ckea_



not modelled 94.1 41 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
115d1vhta_



not modelled 94.1 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
116d2ak3a1



not modelled 94.1 25 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
117d1g6oa_



not modelled 94.1 32 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
118c2pt5D_



not modelled 94.1 18 PDB header:transferase
Chain: D: PDB Molecule:shikimate kinase;
PDBTitle: crystal structure of shikimate kinase (aq_2177) from aquifex aeolicus2 vf5
119c3tlxA_



not modelled 94.1 15 PDB header:transferase
Chain: A: PDB Molecule:adenylate kinase 2;
PDBTitle: crystal structure of pf10_0086, adenylate kinase from plasmodium2 falciparum
120d1ak2a1



not modelled 94.1 27 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases

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