Fold library entry viewer: c3j04A_

Added to library: Sat Nov 19 19:58:38 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Q	K	P	L	S	D	D	E	K	F	L	F	V	D	K	N	F	V	N	N	P	L	A	Q	A	D	W	S	A	K	K	L	V	W	V	P	S	E	K	H	G	F	E	A	A	S	I	K	E	E	K	G	D	E	V	T	V	E	L	Q	E	N	G	K	K	V	T	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	G	G	G	T	S					S										T	T		T	T							S	S	S	S											S	S							T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	D	D	I	Q	K	M	N	P	P	K	F	S	K	V	E	D	M	A	E	L	T	C	L	N	E	A	S	V	L	H	N	L	R	E	R	Y	F	S	G	L	I	Y	T	Y	S	G	L	F	C	V	V	I	N	P	Y	K	Q	L	P	I	Y	S	E	K	I	I	D	M	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T							G	G	G	T	T		S	B	G	G	G		S	S																T	T							T	T								S	S			T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	G	K	K	R	H	E	M	P	P	H	I	Y	A	I	A	D	T	A	Y	R	S	M	L	Q	D	R	E	D	Q	S	I	L	C	T	G	E	S	G	A	G	K	T	E	N	T	K	K	V	I	Q	Y	L	A	V	V	A	S	S	H	K	G	K	K	D	T	S	I	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			T	T	T	S																T	T	T											S	T	T	S	S																S											S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	P	S	F	S	Y	G	E	L	E	K	Q	L	L	Q	A	N	P	I	L	E	A	F	G	N	A	K	T	V	K	N	D	N	S	S	R	F	G	K	F	I	R	I	N	F	D	V	T	G	Y	I	V	G	A	N	I	E	T	Y	L	L	E	K	S	R	A	I	R	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T					S	S		T	T				S										S	S	S														G	G	G	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	D	E	R	T	F	H	I	F	Y	Y	L	I	A	G	A	S	E	Q	M	R	N	D	L	L	L	E	G	F	N	N	Y	T	F	L	S	N	G	H	V	P	I	P	A	Q	Q	D	D	E	M	F	Q	E	T	L	E	A	M	T	I	M	G	F	T	E	E	E	Q	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																						T	T				T	T	S		T	T			S	S	S				T	T																		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	L	R	V	V	S	S	V	L	Q	L	G	N	I	V	F	K	K	E	R	N	T	D	Q	A	S	M	P	D	N	T	A	A	Q	K	V	C	H	L	M	G	I	N	V	T	D	F	T	R	S	I	L	T	P	R	I	K	V	G	R	D	V	V	Q	K	A	Q	T	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G							T	T	T	S	S						S									T	T	T												S						T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Q	A	D	F	A	I	E	A	L	A	K	A	K	F	E	R	L	F	R	W	I	L	T	R	V	N	K	A	L	D	A	S	F	L	G	I	L	D	I	A	G	F	E	I	F	E	I	N	S	F	E	Q	L	C	I	N	Y	T	N	E	K	L	Q	Q	L	F	N	H	T	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														-	-															S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	F	I	L	E	Q	E	E	Y	Q	R	E	G	I	E	W	N	F	I	D	F	G	L	D	L	Q	P	C	I	E	L	I	E	R	P	T	N	P	P	G	V	L	A	L	L	D	E	E	C	W	F	P	K	A	T	D	T	S	F	V	E	K	L	I	Q	E	Q	G	N	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T										T		S																					S	S	S											T	T		T	T														T	T	T		T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	F	Q	K	S	K	Q	L	K	D	K	T	E	F	C	I	L	H	Y	A	G	K	V	T	Y	N	A	S	A	W	L	T	K	N	M	D	P	L	N	D	N	V	T	S	L	L	N	Q	S	S	D	K	F	V	A	D	L	W	K	D	V	D	R	I	V	G	L	D	Q	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S	S		T	T	T	T							T	T								T	T																			T		S								T				T	T							B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	K	M	T	E	S	S	L	P	S	A	S	K	T	K	K	G	M	F	R	T	V	G	Q	L	Y	K	E	Q	L	T	K	L	M	T	T	L	R	N	T	N	P	N	F	V	R	C	I	I	P	N	H	E	K	R	A	G	K	L	D	A	H	L	V	L	E	Q	L	R	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S		B								G	G	G																					T	S	S												S	S			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	N	G	V	L	E	G	I	R	I	C	R	Q	G	F	P	N	R	I	V	F	Q	E	F	R	Q	R	Y	E	I	L	A	A	N	A	I	P	K	G	F	M	D	G	K	Q	A	C	I	L	M	I	K	A	L	E	L	D	P	N	L	Y	R	I	G	Q	S	K	I	F	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T										S																G	G	G	S	T	T	S	S		S	S															T	T			T	T	T					S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	T	G	V	L	A	H	L	E	E	E	R	D	L	K	I	T	D	V	I	I	A	F	Q	A	Q	C	R	G	Y	L	A	R	K	A	F	A	K	R	Q	Q	Q	L	T	A	M	K	V	I	Q	R	N	C	A	A	Y	L	K	L	R	N	W	Q	W	W	R	L	F	T	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	S	S	S	S											S		S	S	S	S											T	T	S	S	S	T	T	T	S	S	S															S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.
Sequence	K	P	L	L	Q	V	T	R	Q	E	E	E	M	Q	A	K	D	E	E	L	Q	R	T	K	E	R	Q	Q	K	A	E	A	E	L	K	E	L	E	Q	K	H	T	Q	L	C	E	E	K	N	L	L	Q	E	K	L	Q	A	E	T	E	L	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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