PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1vmaa2

Fold library id	Fold	Superfamily	Family
d1vmaa2	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	Nitrogenase iron protein-like

Links to external resources
Added to library: Tue Mar 16 13:38:59 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D T K L N V P P E P P F V I M V V G V N G T G K T T S C G K L A K M F V D E G K S V V L A A A D T F R A A A I E Q L K I W G E R V G A T V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S S T T
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S H S E G A D P A A V A F D A V A H A L A R N K D V V I I D T A G R L H T K K N L M E E L R K V H R V V K K K I P D A P H E T L L V I D A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T
S
S
G G G T
T T
S G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T G Q N G L V Q A K I F K E A V N V T G I I L T K L D G T A K G G I T L A I A R E L G I P I K F I G V G E K A E D L R P F D P E A F V E V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S
G G G
S
T T
S S S G G G

. . .

Sequence L S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	T	K	L	N	V	P	P	E	P	P	F	V	I	M	V	V	G	V	N	G	T	G	K	T	T	S	C	G	K	L	A	K	M	F	V	D	E	G	K	S	V	V	L	A	A	A	D	T	F	R	A	A	A	I	E	Q	L	K	I	W	G	E	R	V	G	A	T	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S										T	T	S	S															T	T										T	T																T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	H	S	E	G	A	D	P	A	A	V	A	F	D	A	V	A	H	A	L	A	R	N	K	D	V	V	I	I	D	T	A	G	R	L	H	T	K	K	N	L	M	E	E	L	R	K	V	H	R	V	V	K	K	K	I	P	D	A	P	H	E	T	L	L	V	I	D	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T																	T	T		S											S																G	G	G	T		T	T			S								G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	G	Q	N	G	L	V	Q	A	K	I	F	K	E	A	V	N	V	T	G	I	I	L	T	K	L	D	G	T	A	K	G	G	I	T	L	A	I	A	R	E	L	G	I	P	I	K	F	I	G	V	G	E	K	A	E	D	L	R	P	F	D	P	E	A	F	V	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G															S										G	G	G		S		T	T																			S	S	S	G	G	G
	.	.	.
Sequence	L	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T