Fold library entry viewer: c1m8pB_

Added to library: Tue Mar 16 12:38:48 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	N	A	P	H	G	G	V	L	K	D	L	L	A	R	D	A	P	R	Q	A	E	L	A	A	E	A	E	S	L	P	A	V	T	L	T	E	R	Q	L	C	D	L	E	L	I	M	N	G	G	F	S	P	L	E	G	F	M	N	Q	A	D	Y	D	R	V	C	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			T	T	S	S			B						G	G	G											S																		B	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	R	L	A	D	G	N	V	F	S	M	P	I	T	L	D	A	S	Q	E	V	I	D	E	K	K	L	Q	A	A	S	R	I	T	L	R	D	F	R	D	D	R	N	L	A	I	L	T	I	D	D	I	Y	R	P	D	K	T	K	E	A	K	L	V	F	G	G	D	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B		T	T	S		B			S														T	T			T	T								T	T	T																											S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	P	A	I	V	Y	L	N	N	T	V	K	E	F	Y	I	G	G	K	I	E	A	V	N	K	L	N	H	Y	D	Y	V	A	L	R	Y	T	P	A	E	L	R	V	H	F	D	K	L	G	W	S	R	V	V	A	F	Q	T	R	N	P	M	H	R	A	H	R	E	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	S		S																	S		G	G	G	B													T	T										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	R	A	A	R	S	R	Q	A	N	V	L	I	H	P	V	V	G	L	T	K	P	G	D	I	D	H	F	T	R	V	R	A	Y	Q	A	L	L	P	R	Y	P	N	G	M	A	V	L	G	L	L	G	L	A	M	R	M	G	G	P	R	E	A	I	W	H	A	I	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T											S			T	T															G	G	G	S		T	T	T					B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	N	H	G	A	T	H	F	I	V	G	R	D	H	A	G	P	G	S	N	S	K	G	E	D	F	Y	G	P	Y	D	A	Q	H	A	V	E	K	Y	K	D	E	L	G	I	E	V	V	E	F	Q	M	V	T	Y	L	P	D	T	D	E	Y	R	P	V	D	Q	V	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		S						T	T	T	T				B		T	T	S		B	S	S		T	T														T											B	B	T	T	T	T	B				S	S	S	S		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	V	K	T	L	N	I	S	G	T	E	L	R	R	R	L	R	S	G	A	H	I	P	E	W	F	S	Y	P	E	V	V	K	I	L	R	E	S	N	P	P	R	A	T	Q	G	F	T	I	F	L	T	G	Y	M	N	S	G	K	D	A	I	A	R	A	L	Q	V	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S			B														T					T	T	T	S										T	T	S			T	T	T										S	T	T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	Q	Q	G	G	R	S	V	S	L	L	L	G	D	T	V	R	H	E	L	S	S	E	L	G	F	T	R	E	D	R	H	T	N	I	Q	R	I	A	F	V	A	T	E	L	T	R	A	G	A	A	V	I	A	A	P	I	A	P	Y	E	E	S	R	K	F	A	R	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S														T		T	T				S																					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	S	Q	A	G	S	F	F	L	V	H	V	A	T	P	L	E	H	C	E	Q	S	D	K	R	G	I	Y	A	A	A	R	R	G	E	I	K	G	F	T	G	V	D	D	P	Y	E	T	P	E	K	A	D	L	V	V	D	F	S	K	Q	S	V	R	S	I	V	H	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S																			S	S								T	T	S	S	S	S		B	T	T	T	B						S	S		S					T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.
Sequence	I	L	V	L	E	S	Q	G	F	L	E	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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