Fold library entry viewer: d2mysa2

Added to library: Tue Mar 16 12:48:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	A	E	M	A	A	F	G	E	A	A	P	Y	L	R	S	E	K	E	R	I	E	A	Q	N	P	F	D	M	N	P	P	I	E	D	M	A	M	M	T	H	L	H	E	P	A	V	L	Y	N	L	E	R	Y	A	A	W	M	I	Y	T	Y	S	G	L	F	C	V	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		G	G	G	T	T	T																									B	S	S	S	S	S													T	T	T	T	T							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	P	Y	W	L	P	V	Y	N	P	V	V	L	A	Y	R	G	K	K	R	Q	E	A	P	P	H	I	F	S	I	S	D	N	A	Y	Q	F	M	L	T	D	R	E	N	Q	S	I	L	I	T	G	E	S	G	A	G	K	T	V	N	T	R	V	I	Q	Y	F	A	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G								T	T			T	T	T	S		S																S												T	T	S		S	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	A	S	G	E	G	T	L	E	D	Q	I	I	S	A	N	P	L	L	E	A	F	G	N	A	T	V	R	N	D	N	S	S	R	F	G	F	I	R	I	H	F	G	A	T	G	K	L	A	S	A	D	I	E	T	Y	L	L	E	S	R	V	T	F	Q	L	P	A	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																											S		S	S				B									T	T	S	S											B			T	T	T				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	Y	H	I	F	Y	Q	I	M	S	N	P	E	L	I	D	M	L	L	I	T	T	N	P	Y	D	Y	H	Y	V	S	E	G	E	I	T	V	P	S	I	D	D	Q	E	E	L	M	A	T	D	S	A	I	D	I	L	G	F	S	A	D	E	T	A	I	Y	L	T	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T			S		G	G	G		T	T	T	T	S	S		S			T	T																	T	T			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	M	H	Y	G	N	L	K	F	Q	R	E	E	Q	A	E	P	D	G	T	E	V	A	D	A	A	Y	L	M	G	L	N	S	A	E	L	L	K	A	L	C	Y	P	R	V	G	V	G	N	E	A	V	T	G	E	T	V	S	E	V	H	N	S	V	G	A	L	A	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T						S		B				S		S	T	T	T			T	T	T	T	T												S						S	S	S						B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	E	M	F	L	W	M	V	I	R	I	N	Q	Q	L	D	T	K	Q	P	R	Q	Y	F	I	G	V	L	D	I	A	G	F	E	I	F	D	F	N	S	F	E	Q	L	C	I	N	F	T	N	E	L	Q	Q	F	F	N	H	H	M	F	V	L	E	Q	E	E	Y	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T			S	S																		S	S	B																							T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	E	W	E	F	I	D	F	G	M	D	L	A	A	C	I	E	L	I	E	P	M	G	I	F	S	I	L	E	E	E	C	M	F	P	K	A	T	D	T	S	F	L	Y	D	E	H	L	G	K	S	N	N	F	Q	K	P	K	P	A	A	E	A	H	F	S	L	V	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	G	T											S								T	T	T		S	S			T	T	T							B	T	T	B	S	S		B									S					B	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	G	T	V	D	Y	N	I	S	G	W	L	E	D	P	L	N	E	T	V	I	G	L	Y	Q	T	L	A	L	L	F	A	T	Y	Q	T	V	S	A	L	F	R	E	N	L	N	L	M	A	N	L	R	S	T	H	P	H	F	V	R	C	I	I	P	N	E	T	T	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B							T	T	S																T	T	T	S	S	T	T				S																T																T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	M	E	H	E	L	V	L	H	Q	L	R	C	N	G	V	L	E	G	I	R	I	C	R	K	G	F	P	S	R	V	L	Y	A	D	F	K	Q	R	Y	R	V	L	N	A	S	A	M	D	S	K	K	A	S	E	K	L	L	G	G	G	D	V	D	H	T	Q	Y	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T											S														S	S	S	T	T	T	T				S									T	S	S	S	S		T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Sequence	G	H	T	A	G	L	L	G	L	L	E	E	M	R	D	D	L	A	E	I	I	T	A	T	Q	A	R	C	R	G	F	L	M	R	V	E	Y	R	A	M	V	E	R	R	E	S	I	F	C	I	Q	Y	N	V	R	S	F	M	N	V	H	W	P	W	M	P	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	T	T	T	T												T	T	T	T	T	T	S	S	S	T	T	T	T	T	T	T	T												S

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PDB structure

FASTA sequence

Hidden Markov model

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