Fold library entry viewer: c2otgA_

Added to library: Tue Mar 16 13:20:24 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	D	P	D	F	Q	Y	L	A	V	D	R	K	K	M	M	K	E	Q	T	A	P	F	D	G	K	K	N	C	W	V	P	D	P	K	E	G	F	A	S	A	E	I	Q	S	S	K	G	E	E	I	T	V	K	I	V	S	D	N	S	T	R	T	V	K	K	D	D	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	T	T	T				T	T	T	G	G	G			S	S				T	T	T							T	T	T												S	S							T	T	T								T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	M	N	P	P	K	F	E	K	L	E	D	M	A	N	M	T	Y	L	N	E	A	S	V	L	N	N	L	R	G	R	Y	T	A	G	L	I	Y	T	Y	S	G	L	F	C	I	A	V	N	P	Y	R	R	L	P	I	Y	T	D	S	V	I	A	K	Y	R	G	K	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T	T		S	B	T	T	S		S	S		S													T	T	T							T	T								S	S			G	G	G									T	T			G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	E	I	P	P	H	L	F	S	V	A	D	N	A	Y	Q	N	M	V	T	D	R	E	N	Q	S	C	L	I	T	G	E	S	G	A	G	K	T	E	S	T	K	K	V	I	M	Y	F	A	R	V	A	A	N	L	S	N	L	E	D	Q	I	I	E	A	N	P	V	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S																			T										S	T	T	S	S														T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	F	G	N	A	K	T	V	R	N	N	N	S	S	R	F	G	K	F	I	R	I	H	F	G	P	T	G	K	I	A	G	A	D	I	E	T	Y	L	L	E	K	S	R	V	T	Y	Q	Q	S	A	E	R	N	Y	H	I	F	Y	Q	I	C	S	N	A	I	P	E	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		T	T				S										T	T	S															G	G	G	T				T	T			S	B							T	T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	V	M	L	I	T	P	D	S	G	L	Y	S	F	I	N	Q	G	C	L	T	V	D	N	I	D	D	V	E	E	F	K	L	C	D	E	A	F	D	I	L	G	F	T	K	E	E	K	T	S	M	F	K	C	T	A	S	I	L	H	M	G	E	M	K	F	K	Q	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T			S		G	G	G		T	T	T	S	S	S					T	T																		T																				T	T							S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	E	E	Q	A	E	S	D	G	T	A	E	A	E	K	V	A	F	L	C	G	I	N	A	G	D	L	L	K	A	L	L	K	P	K	V	K	V	G	T	E	M	V	T	K	G	Q	N	L	Q	Q	V	I	N	S	V	G	A	L	S	K	S	L	Y	D	R	M	F	N	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S					S		S											T	S											S						T	T	S								S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	V	K	R	V	N	R	T	L	D	T	K	A	K	R	N	Y	Y	I	G	V	L	D	I	A	G	F	E	I	F	D	F	N	S	F	E	Q	L	C	I	N	Y	T	N	E	R	L	Q	Q	F	F	N	H	H	M	F	V	L	E	Q	E	E	Y	K	K	E	G	I	Q	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																															S	S																																		T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	F	I	D	F	G	M	D	L	Q	M	C	I	D	L	I	E	K	P	M	G	I	L	S	I	L	E	E	E	C	M	F	P	K	A	D	D	K	S	F	Q	D	Y	S	Y	Q	N	H	I	G	K	N	R	M	F	T	K	P	G	K	P	T	R	P	N	Q	G	H	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S											S	T	T	S										S		T	T													T	T	T	T	T		S	S						S		S	S	T	T					S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	E	L	H	H	Y	A	G	N	V	P	Y	S	I	A	G	W	L	D	K	N	K	D	P	I	N	E	N	V	V	S	L	L	A	V	S	K	E	P	L	V	A	E	L	F	R	A	P	D	Q	T	I	S	A	V	H	R	E	S	L	N	K	L	M	C	N	L	R	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T								T	T						S													T		S	S							T																							T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	N	P	H	F	V	R	C	I	I	P	N	L	E	K	D	P	G	L	V	D	A	E	L	V	L	H	Q	L	Q	C	N	G	V	L	E	G	I	R	I	C	R	K	G	F	P	S	R	L	I	Y	S	E	F	K	Q	R	Y	S	I	L	A	P	N	A	I	P	Q	D	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B											S	S			T	T															S	T	T								T	S															G	G	G	S	G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	V	S	E	K	I	L	T	G	L	Q	M	D	P	S	E	Y	R	L	G	T	T	K	V	F	F	K	A	G	V	L	G	N	L	E	E	M	R	D	E	R	L	S	K	I	I	S	M	F	Q	A	H	I	R	G	Y	L	I	R	K	A	Y	K	K	L	Q	D	Q	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			T	T	T					S	S						T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800
Sequence	G	L	S	V	I	Q	R	N	I	R	K	W	L	V	L	R	N	W	Q	W	W	K	L	Y	A	K	V	K	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T								T	T	S

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PDB structure

FASTA sequence

Hidden Markov model

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