PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2w0sB_

Fold library id	PDB Header	Molecule	Title
c2w0sB_	PDB header: transferase	Chain: B: PDB Molecule: thymidylate kinase;	PDBTitle: crystal structure of vaccinia virus thymidylate kinase2 bound to brivudin-5'-monophosphate

Links to external resources
Added to library: Tue Mar 16 13:44:36 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S R G A L I V F E G L D K S G K T T Q C M N I M E S I P A N T I K Y L N F P Q R S T V T G K M I D D Y L T R K K T Y N D H I V N L L F C A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
S
T T S S S
T T S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R W E F A S F I Q E Q L E Q G I T L I V D R Y A F S G V A Y A A A K G A S M T L S K S Y E S G L P K P D L V I F L E S G S K E I N R N V G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S
T T
T T S
S
T T
B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence E I Y E D V T F Q Q K V L Q E Y K K M I E E G D I H W Q I I S S E F E E D V K K E L I K N I V I E A I H T V T G P V G Q L W M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
B T
S S
T T S
S
S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	R	G	A	L	I	V	F	E	G	L	D	K	S	G	K	T	T	Q	C	M	N	I	M	E	S	I	P	A	N	T	I	K	Y	L	N	F	P	Q	R	S	T	V	T	G	K	M	I	D	D	Y	L	T	R	K	K	T	Y	N	D	H	I	V	N	L	L	F	C	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	T	T	S													S		T	T	S						S	S		T	T	S											T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	W	E	F	A	S	F	I	Q	E	Q	L	E	Q	G	I	T	L	I	V	D	R	Y	A	F	S	G	V	A	Y	A	A	A	K	G	A	S	M	T	L	S	K	S	Y	E	S	G	L	P	K	P	D	L	V	I	F	L	E	S	G	S	K	E	I	N	R	N	V	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T										T	T							S												T	T											T	T	S				S													T	T		B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	E	I	Y	E	D	V	T	F	Q	Q	K	V	L	Q	E	Y	K	K	M	I	E	E	G	D	I	H	W	Q	I	I	S	S	E	F	E	E	D	V	K	K	E	L	I	K	N	I	V	I	E	A	I	H	T	V	T	G	P	V	G	Q	L	W	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T		B																	T		S	S							T	T	S																			S			S	S				T	T