Fold library entry viewer: c2bkiA_

Added to library: Tue Mar 16 13:21:22 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	D	G	K	P	V	W	A	P	H	P	T	D	G	F	Q	V	G	N	I	V	D	I	G	P	D	S	L	T	I	E	P	L	N	Q	K	G	K	T	F	L	A	L	I	N	Q	V	F	P	A	E	E	D	S	K	K	D	V	E	D	N	C	S	L	M	Y	L	N	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								T	T	T												S	S							S	S	S	S	S							G	G	G						S		T	T				S	B	G	G	G	S	S	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	L	L	H	N	I	K	V	R	Y	S	K	D	R	I	Y	T	Y	V	A	N	I	L	I	A	V	N	P	Y	F	D	I	P	K	I	Y	S	S	E	T	I	K	S	Y	Q	G	K	S	L	G	T	M	P	P	H	V	F	A	I	A	D	K	A	F	R	D	M	K	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T							T	T								S	S			T	T	S	S	S								S	S			T	T	T	S		S																T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	L	S	Q	S	I	I	V	S	G	E	S	G	A	G	K	T	E	N	T	K	F	V	L	R	Y	L	T	E	S	Y	G	T	G	Q	D	I	D	D	R	I	V	E	A	N	P	L	L	E	A	F	G	N	A	K	T	V	R	N	N	N	S	S	R	F	G	K	F	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											T	T	S	S																		S	S										S													S	S		S	S				S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	H	F	N	E	K	S	S	V	V	G	G	F	V	S	H	Y	L	L	E	K	S	R	I	C	V	Q	G	K	E	E	R	N	Y	H	I	F	Y	R	L	C	A	G	A	S	E	D	I	R	E	R	L	H	L	S	S	P	D	N	F	R	Y	L	N	R	G	C	T	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S														S	G	G	G	T				T	T			S	B										S								T	T				G	G	G						T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	A	N	K	E	T	D	K	Q	I	L	Q	N	R	K	S	P	E	Y	L	K	A	G	S	L	K	D	P	L	L	D	D	H	G	D	F	I	R	M	C	T	A	M	K	K	I	G	L	D	D	E	E	K	L	D	L	F	R	V	V	A	G	V	L	H	L	G	N	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B									S		G	G	G								S			B			S	S																		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	E	E	A	G	S	T	S	G	G	C	N	L	K	N	K	S	T	Q	A	L	E	Y	C	A	E	L	L	G	L	D	Q	D	D	L	R	V	S	L	T	T	R	V	M	L	T	T	A	G	G	A	K	G	T	V	I	K	V	P	L	K	V	E	Q	A	N	N	A	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S	S						S	T	T											T	T										T	T						S		S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	L	A	K	T	V	Y	S	H	L	F	D	H	V	V	N	R	V	N	Q	C	F	P	F	E	T	S	S	Y	F	I	G	V	L	D	I	A	G	F	E	Y	F	E	H	N	S	F	E	Q	F	C	I	N	Y	C	N	E	K	L	Q	Q	F	F	N	E	R	I	L	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	S			S			S															S	S	B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	Q	E	L	Y	Q	K	E	G	L	G	V	N	E	V	H	Y	V	D	N	Q	D	C	I	D	L	I	E	A	R	L	V	G	I	L	D	I	L	D	E	E	N	R	L	P	Q	P	S	D	Q	H	F	T	S	A	V	H	Q	K	H	K	D	H	F	R	L	S	I	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			S																		T	T	T	S									T	T	S	S	S														S	T	T		S	S				G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	S	K	L	A	I	H	R	N	I	R	D	D	E	G	F	I	I	R	H	F	A	G	A	V	C	Y	E	T	T	Q	F	V	E	K	N	N	D	A	L	H	M	S	L	E	S	L	I	C	E	S	R	D	K	F	I	R	E	L	F	E	S	S	T	N	N	N	K	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		S	S	S	T	T	T	T			T	T	S							S	S								T	T					T														T		S	S							T	T							T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	Q	K	A	G	K	L	S	F	I	S	V	G	N	K	F	K	T	Q	L	N	L	L	L	D	K	L	R	S	T	G	A	S	F	I	R	C	I	K	P	N	L	K	M	T	S	H	H	F	E	G	A	Q	I	L	S	Q	L	Q	C	S	G	M	V	S	V	L	D	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						T	T	S																				T	S												T	T			S	S														T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Q	G	G	F	P	S	R	A	S	F	H	E	L	Y	N	M	Y	K	K	Y	M	P	D	K	L	A	R	L	D	P	R	L	F	C	K	A	L	F	K	A	L	G	L	N	E	I	D	Y	K	F	G	L	T	K	V	F	F	R	P	G	K	F	A	E	F	D	Q	I	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S															G	G	G	S							S														T			T	T	T					S	S						T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.
Sequence	S	D	P	D	H	L	A	E	L	V	K	R	V	N	H	W	L	I	C	S	R	W	K	K	V	Q	W	C	S	L	S	V	I	K	L	K	N	K	I	K	Y	R	A	E	A	C	I	K	M	Q	K	T	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T																																	S	S	S		T	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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