Fold library entry viewer: c2ycuA_

Added to library: Sat Apr 28 13:50:55 2012
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	W	T	A	R	R	L	V	W	V	P	S	E	L	H	G	F	E	A	A	A	L	R	D	E	G	E	E	E	A	E	V	E	L	A	E	S	G	R	R	L	R	L	P	R	D	Q	I	Q	R	M	N	P	P	K	F	S	K	A	E	D	M	A	E	L	T	C	L	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G								T	T	T												S	S							T	T	T								G	G	G							G	G	G	T	T		S	B	G	G	G		S	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	V	L	H	N	L	R	E	R	Y	Y	S	G	L	I	Y	T	Y	S	G	L	F	C	V	V	I	N	P	Y	K	Q	L	P	I	Y	T	E	A	I	V	E	M	Y	R	G	K	K	R	H	E	V	P	P	H	V	Y	A	V	T	E	G	A	Y	R	S	M	L	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T							T	T								S	S			S			S								T	T			G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	E	D	Q	S	I	L	C	T	G	E	S	G	A	G	K	T	E	N	T	K	K	V	I	Q	Y	L	A	H	V	A	S	S	P	K	G	R	K	E	P	G	V	P	G	L	E	R	Q	L	L	Q	A	N	P	I	L	E	A	F	G	N	A	K	T	V	K	N	D	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B	T	T	S	S																S			S	S	S		S	S	S							S	T	T	T	S														S	S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	R	F	G	K	F	I	R	I	N	F	D	V	A	G	Y	I	V	G	A	N	I	E	T	Y	L	L	E	K	S	R	A	I	R	Q	A	K	D	E	C	S	F	H	I	F	Y	Q	L	L	G	G	A	G	E	Q	L	K	A	D	L	L	L	E	P	C	S	H	Y	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S										T	T	S														G	G	G	G	T				T	T				B																		T	T				G	G	G		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	T	N	G	P	S	S	S	P	G	Q	E	R	E	L	F	Q	E	T	L	E	S	L	R	V	L	G	F	S	H	E	E	I	I	S	M	L	R	M	V	S	A	V	L	Q	F	G	N	I	A	L	K	R	E	R	N	T	D	Q	A	T	M	P	D	N	T	A	A	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T		S		S	S	T	T	T															T	T																			G	G	G							S	S	S						S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	C	R	L	L	G	L	G	V	T	D	F	S	R	A	L	L	T	P	R	I	K	V	G	R	D	Y	V	Q	K	A	Q	T	K	E	Q	A	D	F	A	L	E	A	L	A	K	A	T	Y	E	R	L	F	R	W	L	V	L	R	L	N	R	A	L	D	R	S	P	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T												S					S	S	S	S																																										S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	A	S	F	L	G	I	L	D	I	A	G	F	E	I	F	Q	L	N	S	F	E	Q	L	C	I	N	Y	T	N	E	K	L	Q	Q	L	F	N	H	T	M	F	V	L	E	Q	E	E	Y	Q	R	E	G	I	P	W	T	F	L	D	F	G	L	D	L	Q	P	C	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S											B				S	S	B																							T										T	T									S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	I	E	R	P	A	N	P	P	G	L	L	A	L	L	D	E	E	C	W	F	P	K	A	T	D	K	S	F	V	E	K	V	A	Q	E	Q	G	G	H	P	K	F	Q	R	P	R	H	L	R	D	Q	A	D	F	S	V	L	H	Y	A	G	K	V	D	Y	K	A	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S										S	S	S	S	T	T															T	T	S	T	T						T	T	T			S	S						T	T								T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	W	L	M	K	N	M	D	P	L	N	D	N	V	A	A	L	L	H	Q	S	T	D	R	L	T	A	E	I	W	K	D	V	E	G	I	V	G	L	E	Q	R	R	G	M	F	R	T	V	G	Q	L	Y	K	E	S	L	S	R	L	M	A	T	L	S	N	T	N	P	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T		S	S							T	S	S			S	S		S							S	S																				T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	R	C	I	V	P	N	H	E	K	R	A	G	K	L	E	P	R	L	V	L	D	Q	L	R	C	N	G	V	L	E	G	I	R	I	C	R	Q	G	F	P	N	R	I	L	F	Q	E	F	R	Q	R	Y	E	I	L	T	P	N	A	I	P	K	G	F	M	D	G	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			T	T				T	T	T									T											S															G	G	G	S	T	T	T	S		S					S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	C	E	K	M	I	Q	A	L	E	L	D	P	N	L	Y	R	V	G	Q	S	K	I	F	F	R	A	G	V	L	A	Q	L	E	E	E	R	A	S	E	Q	T	K	S	D	Y	L	K	R	A	N	E	L	V	Q	W	I	N	D	K	Q	A	S	L	E	S	R	D	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				S				S	S				S	S					S	S		T	T																																	T	T	T	T	T				S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	S	I	E	S	V	Q	S	F	M	N	A	H	K	E	Y	K	K	T	E	K	P	P	K	G	Q	E	V	S	E	L	E	A	I	Y	N	S	L	Q	T	K	L	R	L	I	K	R	E	P	F	V	A	P	A	G	L	T	P	N	E	I	D	S	T	W	S	A	L	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T					T													S	S	S						S	S		S	S	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	A	E	Q	E	H	A	E	A	L	R	I	E	L	K	R	Q	K	K	I	A	V	L	L	Q	K	Y	N	R	I	L	K	K	L	E	N	W	A	T	T	K	S	V	Y	L	G	S	N	E	T	G	D	S	I	T	A	V	Q	A	K	L	K	N	L	E	A	F	D	G	E	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T	T	G	G	G	G																				T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.
Sequence	Q	S	L	E	G	Q	S	N	S	D	L	L	S	I	L	A	Q	L	T	E	L	N	Y	N	G	V	P	E	L	T	E	R	K	D	T	F	F	A	Q	Q	W	T	G	V	K	S	S	A	E	T	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T		S		S	S									T	T	T													T												S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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