Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP36006
DateMon Jul 2 19:17:52 BST 2012
Unique Job ID4e076328807e4d82

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3j04A_
Top template information
PDB header:structural protein
Chain: A: PDB Molecule:myosin-11;
PDBTitle: em structure of the heavy meromyosin subfragment of chick smooth2 muscle myosin with regulatory light chain in phosphorylated state
Confidence and coverage
Confidence:100.0% Coverage: 63%
800 residues ( 63% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRF
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Disorder  ??


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   .........70.........80.........90.........100.........110.........120
Sequence  KNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYN
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???????















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   .........130.........140.........150.........160.........170.........180
Sequence  ENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTL
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   .........190.........200.........210.........220.........230.........240
Sequence  RNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDT
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   .........250.........260.........270.........280.........290.........300
Sequence  YKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAI
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   .........310.........320.........330.........340.........350.........360
Sequence  LWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYH
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   .........370.........380.........390.........400.........410.........420
Sequence  VPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNS
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   .........430.........440.........450.........460.........470.........480
Sequence  FEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGIL
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   .........490.........500.........510.........520.........530.........540
Sequence  AAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDK
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   .........550.........560.........570.........580.........590.........600
Sequence  NKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEP
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   .........610.........620.........630.........640.........650.........660
Sequence  SYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSP
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   .........670.........680.........690.........700.........710.........720
Sequence  DCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYN
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   .........730.........740.........750.........760.........770.........780
Sequence  MAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLG
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   .........790.........800.........810.........820.........830.........840
Sequence  YRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKK
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   .........850.........860.........870.........880.........890.........900
Sequence  TFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKT
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   .........910.........920.........930.........940.........950.........960
Sequence  ELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHP
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???????????????????????????????????????????????????
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   .........970.........980.........990.........1000.........1010.........1020
Sequence  ANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSL
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Disorder  ????????????????????????????????????????????????????????????
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  AATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQN
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  QVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSEL
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  PLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTN
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   .........1210.........1220.........1230.........1240.........1250.........1260
Sequence  QKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADD
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   .........1270..
Sequence  DDNDDGDDDDDW
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Disorder  ????????????
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3j04 chain A

3D model

Region: 3 - 822
Aligned: 800
Modelled: 820
Confidence: 100.0%
Identity: 32%
PDB header:structural protein
Chain: A: PDB Molecule:myosin-11;
PDBTitle: em structure of the heavy meromyosin subfragment of chick smooth2 muscle myosin with regulatory light chain in phosphorylated state

Phyre2

PDB 1i84 chain V

3D model

Region: 3 - 817
Aligned: 793
Modelled: 806
Confidence: 100.0%
Identity: 32%
PDB header:contractile protein
Chain: V: PDB Molecule:smooth muscle myosin heavy chain;
PDBTitle: cryo-em structure of the heavy meromyosin subfragment of2 chicken gizzard smooth muscle myosin with regulatory light3 chain in the dephosphorylated state. only c alphas4 provided for regulatory light chain. only backbone atoms5 provided for s2 fragment.

Phyre2

PDB 2bki chain A

3D model

Region: 3 - 756
Aligned: 736
Modelled: 754
Confidence: 100.0%
Identity: 34%
PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2-iq) crystal structure

Phyre2

PDB 2otg chain A

3D model

Region: 3 - 760
Aligned: 726
Modelled: 754
Confidence: 100.0%
Identity: 35%
PDB header:contractile protein
Chain: A: PDB Molecule:myosin heavy chain;
PDBTitle: rigor-like structures of muscle myosins reveal key2 mechanical elements in the transduction pathways of this3 allosteric motor

Phyre2

PDB 2bkh chain A

3D model

Region: 3 - 754
Aligned: 723
Modelled: 742
Confidence: 100.0%
Identity: 34%
PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2) crystal structure

Phyre2

PDB 1br4 chain E

3D model

Region: 3 - 744
Aligned: 720
Modelled: 742
Confidence: 100.0%
Identity: 34%
PDB header:muscle protein
Chain: E: PDB Molecule:myosin;
PDBTitle: smooth muscle myosin motor domain-essential light chain2 complex with mgadp.bef3 bound at the active site

Phyre2

PDB 2ycu chain A

3D model

Region: 3 - 878
Aligned: 860
Modelled: 876
Confidence: 100.0%
Identity: 29%
PDB header:motor protein
Chain: A: PDB Molecule:non muscle myosin 2c, alpha-actinin;
PDBTitle: crystal structure of human non muscle myosin 2c in pre-power stroke2 state

Phyre2

PDB 2dfs chain A

3D model

Region: 24 - 914
Aligned: 853
Modelled: 880
Confidence: 100.0%
Identity: 34%
PDB header:contractile protein/transport protein
Chain: A: PDB Molecule:myosin-5a;
PDBTitle: 3-d structure of myosin-v inhibited state

Phyre2

PDB 1g8x chain B

3D model

Region: 3 - 871
Aligned: 853
Modelled: 869
Confidence: 100.0%
Identity: 31%
PDB header:structural protein
Chain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3;
PDBTitle: structure of a genetically engineered molecular motor

Phyre2

PDB 3dtp chain A

3D model

Region: 3 - 893
Aligned: 869
Modelled: 891
Confidence: 100.0%
Identity: 29%
PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map

Phyre2

PDB 1kk8 chain A domain 2

3D model

Region: 10 - 764
Aligned: 713
Modelled: 755
Confidence: 100.0%
Identity: 36%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2

PDB 1oe9 chain A

3D model

Region: 3 - 744
Aligned: 698
Modelled: 732
Confidence: 100.0%
Identity: 37%
PDB header:atpase/myosin
Chain: A: PDB Molecule:myosin va;
PDBTitle: crystal structure of myosin v motor with essential light2 chain - nucleotide-free

Phyre2

PDB 1d0x chain A domain 2

3D model

Region: 2 - 715
Aligned: 685
Modelled: 712
Confidence: 100.0%
Identity: 36%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2

PDB 1w7j chain A domain 2

3D model

Region: 30 - 742
Aligned: 682
Modelled: 700
Confidence: 100.0%
Identity: 38%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2

PDB 2vb6 chain A

3D model

Region: 3 - 753
Aligned: 683
Modelled: 730
Confidence: 100.0%
Identity: 35%
PDB header:motor protein
Chain: A: PDB Molecule:myosin vi;
PDBTitle: myosin vi (md-insert2-cam, delta insert1) post-rigor state (2 crystal form 2)

Phyre2

PDB 1w8j chain D

3D model

Region: 24 - 717
Aligned: 661
Modelled: 686
Confidence: 100.0%
Identity: 38%
PDB header:motor protein
Chain: D: PDB Molecule:myosin va;
PDBTitle: crystal structure of myosin v motor domain -2 nucleotide-free

Phyre2

PDB 1w9i chain A

3D model

Region: 3 - 710
Aligned: 652
Modelled: 667
Confidence: 100.0%
Identity: 37%
PDB header:myosin
Chain: A: PDB Molecule:myosin ii heavy chain;
PDBTitle: myosin ii dictyostelium discoideum motor domain s456y bound2 with mgadp-befx

Phyre2

PDB 1lkx chain A

3D model

Region: 37 - 714
Aligned: 638
Modelled: 678
Confidence: 100.0%
Identity: 47%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Motor proteins

Phyre2

PDB 1br2 chain C

3D model

Region: 11 - 715
Aligned: 651
Modelled: 690
Confidence: 100.0%
Identity: 36%
PDB header:muscle protein
Chain: C: PDB Molecule:myosin;
PDBTitle: smooth muscle myosin motor domain complexed with mgadp.alf4

Phyre2

PDB 1o1a chain P

3D model

Region: 3 - 754
Aligned: 709
Modelled: 716
Confidence: 100.0%
Identity: 31%
PDB header:contractile protein
Chain: P: PDB Molecule:skeletal muscle myosin ii;
PDBTitle: molecular models of averaged rigor crossbridges from2 tomograms of insect flight muscle

Phyre2
1

c3j04A_
2

c1i84V_
3

c2bkiA_
4

c2otgA_
5

c2bkhA_
6

c1br4E_
7

c2ycuA_
8

c2dfsA_
9

c1g8xB_
10

c3dtpA_
11

d1kk8a2
12

c1oe9A_
13

d1d0xa2
14

d1w7ja2
15

c2vb6A_
16

c1w8jD_
17

c1w9iA_
18

d1lkxa_
19

c1br2C_
20

c1o1aP_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3j04A_



100.0 32 PDB header:structural protein
Chain: A: PDB Molecule:myosin-11;
PDBTitle: em structure of the heavy meromyosin subfragment of chick smooth2 muscle myosin with regulatory light chain in phosphorylated state
2c1i84V_



100.0 32 PDB header:contractile protein
Chain: V: PDB Molecule:smooth muscle myosin heavy chain;
PDBTitle: cryo-em structure of the heavy meromyosin subfragment of2 chicken gizzard smooth muscle myosin with regulatory light3 chain in the dephosphorylated state. only c alphas4 provided for regulatory light chain. only backbone atoms5 provided for s2 fragment.
3c2bkiA_



100.0 34 PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2-iq) crystal structure
4c2otgA_



100.0 35 PDB header:contractile protein
Chain: A: PDB Molecule:myosin heavy chain;
PDBTitle: rigor-like structures of muscle myosins reveal key2 mechanical elements in the transduction pathways of this3 allosteric motor
5c2bkhA_



100.0 34 PDB header:motor protein/metal-binding protein
Chain: A: PDB Molecule:unconventional myosin;
PDBTitle: myosin vi nucleotide-free (mdinsert2) crystal structure
6c1br4E_



100.0 34 PDB header:muscle protein
Chain: E: PDB Molecule:myosin;
PDBTitle: smooth muscle myosin motor domain-essential light chain2 complex with mgadp.bef3 bound at the active site
7c2ycuA_



100.0 29 PDB header:motor protein
Chain: A: PDB Molecule:non muscle myosin 2c, alpha-actinin;
PDBTitle: crystal structure of human non muscle myosin 2c in pre-power stroke2 state
8c2dfsA_



100.0 34 PDB header:contractile protein/transport protein
Chain: A: PDB Molecule:myosin-5a;
PDBTitle: 3-d structure of myosin-v inhibited state
9c1g8xB_



100.0 31 PDB header:structural protein
Chain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3;
PDBTitle: structure of a genetically engineered molecular motor
10c3dtpA_



100.0 29 PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
11d1kk8a2



100.0 36 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
12c1oe9A_



100.0 37 PDB header:atpase/myosin
Chain: A: PDB Molecule:myosin va;
PDBTitle: crystal structure of myosin v motor with essential light2 chain - nucleotide-free
13d1d0xa2



100.0 36 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
14d1w7ja2



100.0 38 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
15c2vb6A_



100.0 35 PDB header:motor protein
Chain: A: PDB Molecule:myosin vi;
PDBTitle: myosin vi (md-insert2-cam, delta insert1) post-rigor state (2 crystal form 2)
16c1w8jD_



100.0 38 PDB header:motor protein
Chain: D: PDB Molecule:myosin va;
PDBTitle: crystal structure of myosin v motor domain -2 nucleotide-free
17c1w9iA_



100.0 37 PDB header:myosin
Chain: A: PDB Molecule:myosin ii heavy chain;
PDBTitle: myosin ii dictyostelium discoideum motor domain s456y bound2 with mgadp-befx
18d1lkxa_



100.0 47 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
19c1br2C_



100.0 36 PDB header:muscle protein
Chain: C: PDB Molecule:myosin;
PDBTitle: smooth muscle myosin motor domain complexed with mgadp.alf4
20c1o1aP_



100.0 31 PDB header:contractile protein
Chain: P: PDB Molecule:skeletal muscle myosin ii;
PDBTitle: molecular models of averaged rigor crossbridges from2 tomograms of insect flight muscle
21d1br2a2



not modelled 100.0 37 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
22d2mysa2



not modelled 100.0 33 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
23d1mnda2



not modelled 100.0 38 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Motor proteins
24c2ix7C_



not modelled 98.1 29 PDB header:contractile protein/metal binding
Chain: C: PDB Molecule:myosin-5a;
PDBTitle: structure of apo-calmodulin bound to unconventional myosin2 v
25d1iqpa2



not modelled 96.4 15 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
26c2chgB_



not modelled 96.3 20 PDB header:dna-binding protein
Chain: B: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c domains 1 and 2
27d1sxjb2



not modelled 96.2 20 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
28c1sxjB_



not modelled 96.0 20 PDB header:replication
Chain: B: PDB Molecule:activator 1 37 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
29d1vmaa2



not modelled 95.7 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
30d1qzxa3



not modelled 95.6 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
31c1sxjD_



not modelled 95.6 21 PDB header:replication
Chain: D: PDB Molecule:activator 1 41 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
32d1ixsb2



not modelled 95.6 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
33d1sxjc2



not modelled 95.6 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
34c1sxjC_



not modelled 95.6 20 PDB header:replication
Chain: C: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
35d1njfa_



not modelled 95.6 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
36d2qy9a2



not modelled 95.5 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
37d1okkd2



not modelled 95.4 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
38c2chvE_



not modelled 95.4 21 PDB header:dna-binding protein
Chain: E: PDB Molecule:replication factor c small subunit;
PDBTitle: replication factor c adpnp complex
39d1m7ga_



not modelled 95.4 15 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Adenosine-5'phosphosulfate kinase (APS kinase)
40c2z4rB_



not modelled 95.3 22 PDB header:dna binding protein
Chain: B: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: crystal structure of domain iii from the thermotoga2 maritima replication initiation protein dnaa
41c1xxhB_



not modelled 95.2 16 PDB header:transferase
Chain: B: PDB Molecule:dna polymerase iii subunit gamma;
PDBTitle: atpgs bound e. coli clamp loader complex
42d1r6bx2



not modelled 95.2 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
43d1ki9a_



not modelled 95.2 27 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
44c3bosA_



not modelled 95.1 13 PDB header:hydrolase regulator,dna binding protein
Chain: A: PDB Molecule:putative dna replication factor;
PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
45d1ye8a1



not modelled 94.9 45 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
46c3uieB_



not modelled 94.8 19 PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:adenylyl-sulfate kinase 1, chloroplastic;
PDBTitle: crystal structure of adenosine 5'-phosphosulfate kinase from2 arabidopsis thaliana in complex with amppnp and aps
47d1sxjd2



not modelled 94.8 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
48d1l8qa2



not modelled 94.7 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
49c1iqpF_



not modelled 94.7 16 PDB header:replication
Chain: F: PDB Molecule:rfcs;
PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus
50c1sxjE_



not modelled 94.7 12 PDB header:replication
Chain: E: PDB Molecule:activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
51c2qbyB_



not modelled 94.6 21 PDB header:replication/dna
Chain: B: PDB Molecule:cell division control protein 6 homolog 3;
PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
52c2yvuA_



not modelled 94.6 30 PDB header:transferase
Chain: A: PDB Molecule:probable adenylyl-sulfate kinase;
PDBTitle: crystal structure of ape1195
53d1jbka_



not modelled 94.6 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
54c2p65A_



not modelled 94.6 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein pf08_0063;
PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax
55c2gksB_



not modelled 94.5 24 PDB header:transferase
Chain: B: PDB Molecule:bifunctional sat/aps kinase;
PDBTitle: crystal structure of the bi-functional atp sulfurylase-aps kinase from2 aquifex aeolicus, a chemolithotrophic thermophile
56c3pvsA_



not modelled 94.5 26 PDB header:recombination
Chain: A: PDB Molecule:replication-associated recombination protein a;
PDBTitle: structure and biochemical activities of escherichia coli mgsa
57d1ofha_



not modelled 94.5 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
58d1a5ta2



not modelled 94.5 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
59c4dwjB_



not modelled 94.5 20 PDB header:transferase
Chain: B: PDB Molecule:thymidylate kinase;
PDBTitle: crystal structure of thymidylate kinase from staphylococcus aureus in2 complex with thymidine monophosphate
60c3u5zM_



not modelled 94.4 20 PDB header:dna binding protein/dna
Chain: M: PDB Molecule:dna polymerase accessory protein 44;
PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog
61c2jatA_



not modelled 94.4 32 PDB header:transferase
Chain: A: PDB Molecule:deoxyguanosine kinase;
PDBTitle: structure of deoxyadenosine kinase from m.mycoides with2 products dcmp and a flexible dcdp bound
62c2z0hA_



not modelled 94.3 27 PDB header:transferase
Chain: A: PDB Molecule:thymidylate kinase;
PDBTitle: crystal structure of thymidylate kinase in complex with dtdp2 and adp from thermotoga maritima
63d1ls1a2



not modelled 94.3 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nitrogenase iron protein-like
64d1m7gb_



not modelled 94.3 19 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Adenosine-5'phosphosulfate kinase (APS kinase)
65d1khta_



not modelled 94.2 28 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
66c3te6A_



not modelled 94.2 12 PDB header:gene regulation
Chain: A: PDB Molecule:regulatory protein sir3;
PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain
67d2bdta1



not modelled 94.2 36 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Atu3015-like
68d1in4a2



not modelled 94.2 20 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
69d1lv7a_



not modelled 94.2 23 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
70c1sxjA_



not modelled 94.1 25 PDB header:replication
Chain: A: PDB Molecule:activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna)
71d2i3ba1



not modelled 94.0 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
72c2w0sB_



not modelled 94.0 32 PDB header:transferase
Chain: B: PDB Molecule:thymidylate kinase;
PDBTitle: crystal structure of vaccinia virus thymidylate kinase2 bound to brivudin-5'-monophosphate
73d1fnna2



not modelled 94.0 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
74d1rz3a_



not modelled 93.9 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
75c2hcbC_



not modelled 93.9 18 PDB header:replication
Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa;
PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus
76c2plrB_



not modelled 93.8 27 PDB header:transferase
Chain: B: PDB Molecule:probable thymidylate kinase;
PDBTitle: crystal structure of dtmp kinase (st1543) from sulfolobus tokodaii2 strain7
77c2v1uA_



not modelled 93.8 17 PDB header:replication
Chain: A: PDB Molecule:cell division control protein 6 homolog;
PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
78d1qhxa_



not modelled 93.8 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Chloramphenicol phosphotransferase
79c3c8uA_



not modelled 93.8 20 PDB header:transferase
Chain: A: PDB Molecule:fructokinase;
PDBTitle: crystal structure of putative fructose transport system kinase2 (yp_612366.1) from silicibacter sp. tm1040 at 1.95 a resolution
80d1rkba_



not modelled 93.8 27 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
81c3hdtB_



not modelled 93.7 26 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:putative kinase;
PDBTitle: crystal structure of putative kinase from clostridium symbiosum atcc2 14940
82d1e6ca_



not modelled 93.7 15 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Shikimate kinase (AroK)
83c2grjH_



not modelled 93.7 18 PDB header:transferase
Chain: H: PDB Molecule:dephospho-coa kinase;
PDBTitle: crystal structure of dephospho-coa kinase (ec 2.7.1.24)2 (dephosphocoenzyme a kinase) (tm1387) from thermotoga maritima at3 2.60 a resolution
84d1odfa_



not modelled 93.7 12 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
85c2bwjC_



not modelled 93.6 16 PDB header:transferase
Chain: C: PDB Molecule:adenylate kinase 5;
PDBTitle: structure of adenylate kinase 5
86c1ueiB_



not modelled 93.6 27 PDB header:transferase
Chain: B: PDB Molecule:uridine-cytidine kinase 2;
PDBTitle: crystal structure of human uridine-cytidine kinase 22 complexed with a feedback-inhibitor, utp
87c3tqcB_



not modelled 93.6 13 PDB header:transferase
Chain: B: PDB Molecule:pantothenate kinase;
PDBTitle: structure of the pantothenate kinase (coaa) from coxiella burnetii
88d1nksa_



not modelled 93.5 23 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
89c2bl0A_



not modelled 93.5 23 PDB header:muscle protein
Chain: A: PDB Molecule:major plasmodial myosin heavy chain;
PDBTitle: physarum polycephalum myosin ii regulatory domain
90d1sxje2



not modelled 93.5 13 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
91c1v8jA_



not modelled 93.5 17 PDB header:structural protein
Chain: A: PDB Molecule:kinesin-like protein kif2c;
PDBTitle: the crystal structure of the minimal functional domain of2 the microtubule destabilizer kif2c complexed with mg-adp
92c3vaaC_



not modelled 93.4 32 PDB header:transferase
Chain: C: PDB Molecule:shikimate kinase;
PDBTitle: 1.7 angstrom resolution crystal structure of shikimate kinase from2 bacteroides thetaiotaomicron
93c3ch4B_



not modelled 93.4 18 PDB header:transferase
Chain: B: PDB Molecule:phosphomevalonate kinase;
PDBTitle: the crystal structure of human phosphomavelonate kinase at2 1.8 a resolution
94c2ccjA_



not modelled 93.4 23 PDB header:transferase
Chain: A: PDB Molecule:thymidylate kinase;
PDBTitle: crystal structure of s. aureus thymidylate kinase complexed2 with thymidine monophosphate
95d1g41a_



not modelled 93.4 19 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
96c2w58B_



not modelled 93.4 21 PDB header:hydrolase
Chain: B: PDB Molecule:primosome component (helicase loader);
PDBTitle: crystal structure of the dnai
97d1w5sa2



not modelled 93.4 28 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
98d1kaga_



not modelled 93.4 27 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Shikimate kinase (AroK)
99d1knqa_



not modelled 93.3 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Gluconate kinase
100c3ec2A_



not modelled 93.3 21 PDB header:replication
Chain: A: PDB Molecule:dna replication protein dnac;
PDBTitle: crystal structure of the dnac helicase loader
101c3t61A_



not modelled 93.3 21 PDB header:transferase
Chain: A: PDB Molecule:gluconokinase;
PDBTitle: crystal structure of a gluconokinase from sinorhizobium meliloti 1021
102d1sq5a_



not modelled 93.2 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Phosphoribulokinase/pantothenate kinase
103c1fnnB_



not modelled 93.2 18 PDB header:cell cycle
Chain: B: PDB Molecule:cell division control protein 6;
PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum
104d1sxja2



not modelled 93.2 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Extended AAA-ATPase domain
105c2vliB_



not modelled 93.2 27 PDB header:transferase
Chain: B: PDB Molecule:antibiotic resistance protein;
PDBTitle: structure of deinococcus radiodurans tunicamycin resistance2 protein
106d1g6oa_



not modelled 93.1 35 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RecA protein-like (ATPase-domain)
107c3akcA_



not modelled 93.1 36 PDB header:transferase
Chain: A: PDB Molecule:cytidylate kinase;
PDBTitle: crystal structure of cmp kinase in complex with cdp and adp from2 thermus thermophilus hb8
108d3adka_



not modelled 93.1 22 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
109c1nsfA_



not modelled 93.1 23 PDB header:protein transport
Chain: A: PDB Molecule:n-ethylmaleimide sensitive factor;
PDBTitle: d2 hexamerization domain of n-ethylmaleimide sensitive factor (nsf)
110c2j41A_



not modelled 93.1 33 PDB header:transferase
Chain: A: PDB Molecule:guanylate kinase;
PDBTitle: crystal structure of staphylococcus aureus guanylate2 monophosphate kinase
111c2ql6H_



not modelled 93.1 36 PDB header:signaling protein,transferase
Chain: H: PDB Molecule:nicotinamide riboside kinase 1;
PDBTitle: human nicotinamide riboside kinase (nrk1)
112c3fdiA_



not modelled 93.1 27 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of uncharacterized protein from eubacterium2 ventriosum atcc 27560.
113d1m8pa3



not modelled 93.0 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ATP sulfurylase C-terminal domain
114c2owmC_



not modelled 93.0 20 PDB header:motor protein
Chain: C: PDB Molecule:related to kinesin-like protein kif1c;
PDBTitle: motor domain of neurospora crassa kinesin-3 (nckin3)
115d2cdna1



not modelled 93.0 32 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
116c1scmA_



not modelled 93.0 24 PDB header:calcium-binding protein
Chain: A: PDB Molecule:myosin heavy chain;
PDBTitle: structure of the regulatory domain of scallop myosin at 2.82 angstroms resolution
117d1tmka_



not modelled 92.9 19 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Nucleotide and nucleoside kinases
118c1in8A_



not modelled 92.9 20 PDB header:dna binding protein
Chain: A: PDB Molecule:holliday junction dna helicase ruvb;
PDBTitle: thermotoga maritima ruvb t158v
119c1w5sB_



not modelled 92.9 26 PDB header:replication
Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2;
PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form)
120c1m8pB_



not modelled 92.9 16 PDB header:transferase
Chain: B: PDB Molecule:sulfate adenylyltransferase;
PDBTitle: crystal structure of p. chrysogenum atp sulfurylase in the t-state

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