Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA0JNT9
DateWed Jul 10 14:25:48 BST 2013
Unique Job IDd51adee9863cf96a
SequenceMSAFCLGLAG ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:124.376 Y:62.119 Z:180.871
Model (left) based on template c1ciiA_
Top template information
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
Confidence and coverage
Confidence: 98.4% Coverage: 76%
440 residues ( 76% of your sequence) have been modelled with 98.4% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MSAFCLGLAGRASAPAEPDSACCMELPAGAGDAVRSPATAAALVSFPGGPGELELALEEE
Secondary structure 
SS confidence 
Disorder  ???
???????????????
?????????????
??????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  LALLAAGERSSEPGEHPQAEPESPVEGHGPPLPPPPTQDPELLSVIRQKEKDLVLAARLG
Secondary structure 
SS confidence 
Disorder 
?
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  QDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREK
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  NSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  HDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEEL
Secondary structure 
SS confidence 
Disorder 
?
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  EQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRT
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........430.........440.........450.........460.........470.........480
Sequence  ALNDLKRLIQSIVDGVEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEA
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........490.........500.........510.........520.........530.........540
Sequence  IAKKNAVELELAKCKMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDRQLMDTHLK
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........550.........560.........570.......
Sequence  EQSRPAAAAFPRGHGVGRGQEPSTADGKRLFSFFRKI
Secondary structure 
SS confidence 
Disorder 
????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 7%)
Alpha helix ( 93%)
Beta strand ( 0%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1cii chain A

3D model

Region: 7 - 521
Aligned: 440
Modelled: 442
Confidence: 98.4%
Identity: 10%
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia

Phyre2

PDB 1bg1 chain A

3D model

Region: 95 - 274
Aligned: 180
Modelled: 180
Confidence: 97.2%
Identity: 11%
PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex

Phyre2

PDB 1c1g chain A

3D model

Region: 244 - 529
Aligned: 284
Modelled: 286
Confidence: 97.2%
Identity: 14%
PDB header:contractile protein
Chain: A: PDB Molecule:tropomyosin;
PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form

Phyre2

PDB 1bf5 chain A

3D model

Region: 104 - 265
Aligned: 162
Modelled: 162
Confidence: 96.8%
Identity: 9%
PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex

Phyre2

PDB 3cwg chain A

3D model

Region: 131 - 286
Aligned: 156
Modelled: 156
Confidence: 95.8%
Identity: 11%
PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment

Phyre2

PDB 3ghg chain I

3D model

Region: 145 - 260
Aligned: 116
Modelled: 116
Confidence: 95.7%
Identity: 9%
PDB header:blood clotting
Chain: I: PDB Molecule:fibrinogen gamma chain;
PDBTitle: crystal structure of human fibrinogen

Phyre2

PDB 1deq chain F

3D model

Region: 143 - 253
Aligned: 111
Modelled: 111
Confidence: 95.4%
Identity: 15%
PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen (gamma chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)

Phyre2

PDB 3oja chain A

3D model

Region: 65 - 245
Aligned: 181
Modelled: 181
Confidence: 94.7%
Identity: 11%
PDB header:protein binding
Chain: A: PDB Molecule:leucine-rich immune molecule 1;
PDBTitle: crystal structure of lrim1/apl1c complex

Phyre2

PDB 1ei3 chain C

3D model

Region: 87 - 212
Aligned: 126
Modelled: 126
Confidence: 93.8%
Identity: 6%
PDB header:blood clotting
Chain: C: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen

Phyre2

PDB 2v71 chain A

3D model

Region: 86 - 238
Aligned: 153
Modelled: 153
Confidence: 92.3%
Identity: 16%
PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: coiled-coil region of nudel

Phyre2

PDB 2oev chain A

3D model

Region: 182 - 515
Aligned: 333
Modelled: 334
Confidence: 92.0%
Identity: 9%
PDB header:protein transport
Chain: A: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: crystal structure of alix/aip1

Phyre2

PDB 3oja chain B

3D model

Region: 102 - 246
Aligned: 145
Modelled: 145
Confidence: 89.3%
Identity: 10%
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex

Phyre2

PDB 2ocy chain B

3D model

Region: 55 - 201
Aligned: 147
Modelled: 146
Confidence: 88.4%
Identity: 11%
PDB header:endocytosis/exocytosis
Chain: B: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: complex of the guanine exchange factor sec2p and the rab2 gtpase sec4p

Phyre2

PDB 1ei3 chain E

3D model

Region: 140 - 253
Aligned: 114
Modelled: 114
Confidence: 88.3%
Identity: 15%
PDB header:blood clotting
Chain: E: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen

Phyre2

PDB 3hiz chain B

3D model

Region: 410 - 533
Aligned: 124
Modelled: 124
Confidence: 87.7%
Identity: 6%
PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit
PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha

Phyre2

PDB 3ipk chain A

3D model

Region: 104 - 213
Aligned: 110
Modelled: 110
Confidence: 87.7%
Identity: 15%
PDB header:cell adhesion
Chain: A: PDB Molecule:agi/ii;
PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans

Phyre2

PDB 2efr chain B

3D model

Region: 50 - 201
Aligned: 151
Modelled: 152
Confidence: 82.5%
Identity: 13%
PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution

Phyre2

PDB 2d3e chain D

3D model

Region: 403 - 532
Aligned: 128
Modelled: 130
Confidence: 82.4%
Identity: 12%
PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin

Phyre2

PDB 3ghg chain K

3D model

Region: 152 - 267
Aligned: 116
Modelled: 116
Confidence: 82.0%
Identity: 9%
PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen

Phyre2

PDB 3q8t chain B

3D model

Region: 437 - 529
Aligned: 91
Modelled: 93
Confidence: 78.5%
Identity: 19%
PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein

Phyre2

PDB 3na7 chain A

3D model

Region: 375 - 564
Aligned: 189
Modelled: 189
Confidence: 61.8%
Identity: 10%
PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874

Phyre2
1
c1ciiA_
2
c1bg1A_
3
c1c1gA_
4
c1bf5A_
5
c3cwgA_
6
c3ghgI_
7
c1deqF_
8
c3ojaA_
9
c1ei3C_
10
c2v71A_
11
c2oevA_
12
c3ojaB_
13
c2ocyB_
14
c1ei3E_
15
c3hizB_
16
c3ipkA_
17
c2efrB_
18
c2d3eD_
19
c3ghgK_
20
c3q8tB_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
c3na7A_
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
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63
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65
66
67
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69
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71
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73
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97



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1ciiA_
98.4 10 PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
2c1bg1A_
97.2 11 PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex
3c1c1gA_
97.2 14 PDB header:contractile protein
Chain: A: PDB Molecule:tropomyosin;
PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form
4c1bf5A_
96.8 9 PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex
5c3cwgA_
95.8 11 PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
6c3ghgI_
95.7 9 PDB header:blood clotting
Chain: I: PDB Molecule:fibrinogen gamma chain;
PDBTitle: crystal structure of human fibrinogen
7c1deqF_
95.4 15 PDB header:blood clotting
Chain: F: PDB Molecule:fibrinogen (gamma chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
8c3ojaA_
94.7 11 PDB header:protein binding
Chain: A: PDB Molecule:leucine-rich immune molecule 1;
PDBTitle: crystal structure of lrim1/apl1c complex
9c1ei3C_
93.8 6 PDB header:blood clotting
Chain: C: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
10c2v71A_
92.3 16 PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: coiled-coil region of nudel
11c2oevA_
92.0 9 PDB header:protein transport
Chain: A: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: crystal structure of alix/aip1
12c3ojaB_
89.3 10 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
13c2ocyB_
88.4 11 PDB header:endocytosis/exocytosis
Chain: B: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: complex of the guanine exchange factor sec2p and the rab2 gtpase sec4p
14c1ei3E_
88.3 15 PDB header:blood clotting
Chain: E: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
15c3hizB_
87.7 6 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit
PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha
16c3ipkA_
87.7 15 PDB header:cell adhesion
Chain: A: PDB Molecule:agi/ii;
PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
17c2efrB_
82.5 13 PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
18c2d3eD_
82.4 12 PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin
19c3ghgK_
82.0 9 PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
20c3q8tB_
78.5 19 PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein
21c4a55B_
not modelled 78.5 5 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: crystal structure of p110alpha in complex with ish2 of p85alpha and2 the inhibitor pik-108
22c3o0zD_
not modelled 77.6 19 PDB header:transferase
Chain: D: PDB Molecule:rho-associated protein kinase 1;
PDBTitle: crystal structure of a coiled-coil domain from human rock i
23c1deqD_
not modelled 75.7 6 PDB header:blood clotting
Chain: D: PDB Molecule:fibrinogen (alpha chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
24c3hnwB_
not modelled 74.9 8 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750
25c2fxmB_
not modelled 73.5 14 PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment
26c3tnuB_
not modelled 73.3 22 PDB header:cytosolic protein
Chain: B: PDB Molecule:keratin, type ii cytoskeletal 5;
PDBTitle: heterocomplex of coil 2b domains of human intermediate filament2 proteins, keratin 5 (krt5) and keratin 14 (krt14)
27c2v66C_
not modelled 71.4 21 PDB header:structural protein
Chain: C: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c
28c3u59C_
not modelled 71.1 9 PDB header:contractile protein
Chain: C: PDB Molecule:tropomyosin beta chain;
PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta
29c2gl2B_
not modelled 70.9 21 PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada
30c4a7fB_
not modelled 70.3 15 PDB header:structural protein/hydrolase
Chain: B: PDB Molecule:tropomyosin 1 alpha;
PDBTitle: structure of the actin-tropomyosin-myosin complex (rigor atm 3)
31c2v1yB_
not modelled 67.5 5 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: structure of a phosphoinositide 3-kinase alpha adaptor-2 binding domain (abd) in a complex with the ish2 domain3 from p85 alpha
32c1wt6B_
not modelled 66.8 18 PDB header:transferase
Chain: B: PDB Molecule:myotonin-protein kinase;
PDBTitle: coiled-coil domain of dmpk
33c1yvlB_
not modelled 66.4 10 PDB header:signaling protein
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: structure of unphosphorylated stat1
34c1deqO_
not modelled 65.8 7 PDB header:blood clotting
Chain: O: PDB Molecule:fibrinogen (beta chain);
PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)
35c1y4cA_
not modelled 65.5 11 PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
36c3tnuA_
not modelled 64.6 17 PDB header:cytosolic protein
Chain: A: PDB Molecule:keratin, type i cytoskeletal 14;
PDBTitle: heterocomplex of coil 2b domains of human intermediate filament2 proteins, keratin 5 (krt5) and keratin 14 (krt14)
37c3na7A_
61.8 10 PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
38c3ol1A_
not modelled 55.5 11 PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b
39c3swkB_
not modelled 55.2 18 PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin coil1b fragment
40c2qa7C_
not modelled 52.5 22 PDB header:actin binding
Chain: C: PDB Molecule:huntingtin-interacting protein 1;
PDBTitle: crystal structure of huntingtin-interacting protein 12 (hip1) coiled-coil domain with a basic surface suitable3 for hip-protein interactor (hippi)
41c4hpqC_
not modelled 47.8 9 PDB header:protein transport
Chain: C: PDB Molecule:atg17;
PDBTitle: crystal structure of the atg17-atg31-atg29 complex
42c1jchC_
not modelled 46.9 8 PDB header:ribosome inhibitor, hydrolase
Chain: C: PDB Molecule:colicin e3;
PDBTitle: crystal structure of colicin e3 in complex with its immunity protein
43c3l9oA_
not modelled 45.4 10 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dob1;
PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome
44c3dtpA_
not modelled 42.4 13 PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
45c3r6nA_
not modelled 40.4 8 PDB header:cell adhesion
Chain: A: PDB Molecule:desmoplakin;
PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain
46c2b9cA_
not modelled 39.2 13 PDB header:contractile protein
Chain: A: PDB Molecule:striated-muscle alpha tropomyosin;
PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin
47c3vkgB_
not modelled 39.1 9 PDB header:motor protein
Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain
48c2i1kA_
not modelled 32.3 15 PDB header:cell adhesion, membrane protein
Chain: A: PDB Molecule:moesin;
PDBTitle: moesin from spodoptera frugiperda reveals the coiled-coil domain at2 3.0 angstrom resolution
49c3movB_
not modelled 26.7 22 PDB header:structural protein
Chain: B: PDB Molecule:lamin-b1;
PDBTitle: crystal structure of human lamin-b1 coil 2 segment
50c1gk4A_
not modelled 25.4 16 PDB header:vimentin
Chain: A: PDB Molecule:vimentin;
PDBTitle: human vimentin coil 2b fragment (cys2)
51c2rd0B_
not modelled 21.0 9 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: structure of a human p110alpha/p85alpha complex
52c3a7pB_
not modelled 19.6 13 PDB header:protein transport
Chain: B: PDB Molecule:autophagy protein 16;
PDBTitle: the crystal structure of saccharomyces cerevisiae atg16
53c4gkwB_
not modelled 18.1 11 PDB header:structural protein
Chain: B: PDB Molecule:spindle assembly abnormal protein 6;
PDBTitle: crystal structure of the coiled-coil domain of c. elegans sas-6
54c2qa7B_
not modelled 17.4 28 PDB header:actin binding
Chain: B: PDB Molecule:huntingtin-interacting protein 1;
PDBTitle: crystal structure of huntingtin-interacting protein 12 (hip1) coiled-coil domain with a basic surface suitable3 for hip-protein interactor (hippi)
55c3qh9A_
not modelled 16.2 20 PDB header:structural protein
Chain: A: PDB Molecule:liprin-beta-2;
PDBTitle: human liprin-beta2 coiled-coil
56c2y3aB_
not modelled 16.2 6 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta;
PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941
57c2no2A_
not modelled 15.0 17 PDB header:cell adhesion
Chain: A: PDB Molecule:huntingtin-interacting protein 1;
PDBTitle: crystal structure of the dllrkn-containing coiled-coil2 domain of huntingtin-interacting protein 1
58c2jeeA_
not modelled 14.5 18 PDB header:cell cycle
Chain: A: PDB Molecule:yiiu;
PDBTitle: xray structure of e. coli yiiu
59c1quuA_
not modelled 14.2 10 PDB header:contractile protein
Chain: A: PDB Molecule:human skeletal muscle alpha-actinin 2;
PDBTitle: crystal structure of two central spectrin-like repeats from2 alpha-actinin
60c2xdjF_
not modelled 13.7 20 PDB header:unknown function
Chain: F: PDB Molecule:uncharacterized protein ybgf;
PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf
61c3jzaB_
not modelled 13.5 33 PDB header:transport protein
Chain: B: PDB Molecule:uncharacterized protein drra;
PDBTitle: crystal structure of human rab1b in complex with the gef domain of2 drra/sidm from legionella pneumophila
62c3g67A_
not modelled 13.1 8 PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
63c2xv5A_
not modelled 12.9 20 PDB header:structural protein
Chain: A: PDB Molecule:lamin-a/c;
PDBTitle: human lamin a coil 2b fragment
64c2oexB_
not modelled 12.9 7 PDB header:protein transport
Chain: B: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: structure of alix/aip1 v domain
65c3n6oB_
not modelled 12.7 33 PDB header:signaling protein
Chain: B: PDB Molecule:guanine nucleotide exchange factor;
PDBTitle: crystal structure of the gef and p4m domain of drra/sidm from2 legionella pneumophila
66c4jioA_
not modelled 12.3 7 PDB header:protein binding
Chain: A: PDB Molecule:bro1;
PDBTitle: bro1 v domain and ubiquitin
67c2xdjC_
not modelled 12.2 11 PDB header:unknown function
Chain: C: PDB Molecule:uncharacterized protein ybgf;
PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf
68c2i1jA_
not modelled 12.1 9 PDB header:cell adhesion, membrane protein
Chain: A: PDB Molecule:moesin;
PDBTitle: moesin from spodoptera frugiperda at 2.1 angstroms resolution
69c1ik9B_
not modelled 11.6 13 PDB header:gene regulation/ligase
Chain: B: PDB Molecule:dna repair protein xrcc4;
PDBTitle: crystal structure of a xrcc4-dna ligase iv complex
70c3q0xA_
not modelled 11.5 11 PDB header:structural protein
Chain: A: PDB Molecule:centriole protein;
PDBTitle: n-terminal coiled-coil dimer domain of c. reinhardtii sas-6 homolog2 bld12p
71c3n4xB_
not modelled 11.4 13 PDB header:replication
Chain: B: PDB Molecule:monopolin complex subunit csm1;
PDBTitle: structure of csm1 full-length
72c3vkgA_
not modelled 10.3 12 PDB header:motor protein
Chain: A: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: x-ray structure of an mtbd truncation mutant of dynein motor domain
73c1l8dB_
not modelled 10.3 24 PDB header:replication
Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase;
PDBTitle: rad50 coiled-coil zn hook
74c2wpqA_
not modelled 9.8 9 PDB header:membrane protein
Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment;
PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion)
75c1gk6B_
not modelled 9.8 11 PDB header:vimentin
Chain: B: PDB Molecule:vimentin;
PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b)
76c2x7aB_
not modelled 9.5 17 PDB header:immune system
Chain: B: PDB Molecule:bone marrow stromal antigen 2;
PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain
77c3s4rB_
not modelled 9.0 14 PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin coil1a/1b fragment with a stabilizing2 mutation
78c3m9bK_
not modelled 8.7 20 PDB header:chaperone
Chain: K: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
79c2kn0A_
not modelled 8.2 29 PDB header:apoptosis
Chain: A: PDB Molecule:fn14;
PDBTitle: solution nmr structure of xenopus fn14
80c1x8yA_
not modelled 8.0 18 PDB header:structural protein
Chain: A: PDB Molecule:lamin a/c;
PDBTitle: human lamin coil 2b
81c3u1aC_
not modelled 7.8 14 PDB header:contractile protein
Chain: C: PDB Molecule:smooth muscle tropomyosin alpha;
PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha
82c2eqbC_
not modelled 7.7 11 PDB header:endocytosis/exocytosis
Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex
83d1ykhb1
not modelled 7.4 13 Fold:Mediator hinge subcomplex-like
Superfamily:Mediator hinge subcomplex-like
Family:CSE2-like
84c4etpA_
not modelled 7.0 15 PDB header:motor protein
Chain: A: PDB Molecule:kinesin-like protein kar3;
PDBTitle: c-terminal motor and motor homology domain of kar3vik1 fused to a2 synthetic heterodimeric coiled coil
85c2e7sM_
not modelled 7.0 14 PDB header:endocytosis/exocytosis
Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the yeast sec2p gef domain
86c4e61A_
not modelled 6.5 18 PDB header:cell cycle
Chain: A: PDB Molecule:protein bim1;
PDBTitle: crystal structure of the eb1-like motif of bim1p
87c1cz7C_
not modelled 6.2 6 PDB header:contractile protein
Chain: C: PDB Molecule:microtubule motor protein ncd;
PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations
88c2ve7B_
not modelled 6.0 20 PDB header:cell cycle
Chain: B: PDB Molecule:kinetochore protein hec1, kinetochore protein spc25;
PDBTitle: crystal structure of a bonsai version of the human ndc802 complex
89c4flaC_
not modelled 5.9 16 PDB header:transcription
Chain: C: PDB Molecule:regulation of nuclear pre-mrna domain-containing protein
PDBTitle: crystal structure of human rprd1b, carboxy-terminal domain
90c1m1jA_
not modelled 5.6 13 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha subunit;
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
91c3a6mB_
not modelled 5.6 12 PDB header:chaperone
Chain: B: PDB Molecule:protein grpe;
PDBTitle: crystal structure of grpe from thermus thermophilus hb8
92c3cvfA_
not modelled 5.5 14 PDB header:signaling protein
Chain: A: PDB Molecule:homer protein homolog 3;
PDBTitle: crystal structure of the carboxy terminus of homer3
93c3lssA_
not modelled 5.4 12 PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp
94d2joka1
not modelled 5.3 36 Fold:SopE-like GEF domain
Superfamily:SopE-like GEF domain
Family:SopE-like GEF domain
95c1fosF_
not modelled 5.2 18 PDB header:transcription/dna
Chain: F: PDB Molecule:c-jun proto-oncogene protein;
PDBTitle: two human c-fos:c-jun:dna complexes
96c1jocA_
not modelled 5.1 14 PDB header:membrane protein
Chain: A: PDB Molecule:early endosomal autoantigen 1;
PDBTitle: eea1 homodimer of c-terminal fyve domain bound to inositol2 1,3-diphosphate
97c1d6gA_
not modelled 5.1 75 PDB header:hormone/growth factor
Chain: A: PDB Molecule:cholecystokinin type a receptor;
PDBTitle: molecular complex of cholecystokinin-8 and n-terminus of2 the cholecystokinin a receptor by nmr spectroscopy

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