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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1ei3C_

Fold library idPDB HeaderMoleculeTitle
c1ei3C_PDB header: blood clottingChain: C: PDB Molecule: fibrinogen;PDBTitle: crystal structure of native chicken fibrinogen


Added to library: Tue Mar 16 12:08:22 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YIATRENCCILDERFGSYCPTTCGIADFFNKYRLTTDGELLEIEGLLQQATNSTGSIEYLIQHIKTIYPS
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Known secondary structure (DSSP)








S

SS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EKQTLPQSIEQLTQKSKKIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLESHCQEPCK
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Known secondary structure (DSSP) TTSTTT
S


 .........150.........160.........170.........180.........190.........200.........210
Sequence DTAEIQETTGRDCQDIANKGARKSGLYFIKPQKAKQSFLVYCEIDTYGNGWTVLQRRLDGSEDFRRNWVQ
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Known secondary structure (DSSP)
S



S

BSSTT



S

SS
SS

TTS
SSS
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence YKEGFGHLSPDDTTEFWLGNEKIHLITTQSTLPYALRIELEDWSGKKGTADYAVFKVGTEEDKYRLTYAY
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Known secondary structure (DSSP)

S


TTS
S

B

SGGG


SSS
BS


GGGTT

SB
 .........290.........300.........310.........320.........330.........340.........350
Sequence FIGGERGDAFDGFNFGDDPSDKSYTYHNGMRFSTFDNDNDNFEGNCAEQDGSGWWMNRCHAGHLNGPYYI
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Known secondary structure (DSSP)



TT

GGG



SS
TTT

TTB

SSS

SSSSS
TS

SSS
SSSS


T
 .........360.........370.........380.........390.......
Sequence GGVYSRDTGTNSYDNGIIWATWRDRWYSMKKTTMKIIPFNRLSIDGQ
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Known secondary structure (DSSP) TSB

GGGSTTSS

SSSTTS
TTB

S
TTSSTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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