Fold library entry viewer: c1yvlB_

Added to library: Tue Mar 16 12:17:54 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Q	W	Y	E	L	Q	Q	L	D	S	K	F	L	E	Q	V	H	Q	L	Y	D	D	S	F	P	M	E	I	R	Q	Y	L	A	Q	W	L	E	K	Q	D	W	E	H	A	A	N	D	V	S	F	A	T	I	R	F	H	D	L	L	S	Q	L	D	D	Q	Y	S	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S		T	T	T						T	T			T	T	S								T							S						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	L	E	N	N	F	L	L	Q	H	N	I	R	K	S	K	R	N	L	Q	D	N	F	Q	E	D	P	I	Q	M	S	M	I	I	Y	S	C	L	K	E	E	R	K	I	L	E	N	A	Q	R	F	N	M	L	D	K	Q	K	E	L	D	S	K	V	R	N	V	K	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T																				T	T																						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	M	C	I	E	H	E	I	K	S	L	E	D	L	Q	D	E	Y	D	F	K	C	K	T	L	Q	N	R	E	H	D	Q	K	Q	E	Q	L	L	L	K	K	M	Y	L	M	L	D	N	K	R	K	E	V	V	H	K	I	I	E	L	L	N	V	T	E	L	T	Q	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T	T					T	T			T	T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	I	N	D	E	L	V	E	W	K	R	R	Q	Q	S	A	C	I	G	G	P	P	N	A	C	L	D	Q	L	Q	N	W	F	T	I	V	A	E	S	L	Q	Q	V	R	Q	Q	L	K	K	L	E	E	L	E	Q	K	Y	T	Y	E	H	D	P	I	T	K	N	K	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T															T		S					S																																		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	W	D	R	T	F	S	L	F	Q	Q	L	I	Q	S	S	F	V	V	E	R	Q	P	C	M	P	T	H	P	Q	R	P	L	V	L	K	T	G	V	Q	F	T	V	K	L	R	L	L	V	K	L	Q	E	L	N	Y	N	L	K	V	K	V	L	F	D	K	D	V	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T										T	T		T	T		T	T				T	T	S									S	S			G	G	G	T	T									S		S		S	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	N	T	V	K	G	F	R	K	F	N	I	L	G	T	H	T	K	V	M	N	M	E	E	S	T	N	G	S	L	A	A	E	F	R	H	L	Q	L	K	E	Q	G	P	L	I	V	T	E	E	L	H	S	L	S	F	E	T	Q	L	C	Q	P	G	L	V	I	D	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S	S	S								S											S	S	S																		S	S		S															T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	T	S	L	P	V	V	V	I	S	N	V	S	Q	L	P	S	G	W	A	S	I	L	W	Y	N	M	L	V	A	E	P	R	N	L	S	F	F	L	T	P	P	C	A	R	W	A	Q	L	S	E	V	L	S	W	Q	F	S	S	V	T	K	R	G	L	N	V	D	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						S	S	G	G	G																	S	S			S			T	T	S																		T	T	T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	M	L	G	E	K	L	L	G	P	N	A	S	P	D	G	L	I	P	W	T	R	F	C	K	E	N	I	N	D	K	N	F	P	F	W	L	W	I	E	S	I	L	E	L	I	K	K	H	L	L	P	L	W	N	D	G	C	I	M	G	F	I	S	K	E	R	E	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		S	S			T	T										T	S			T	T	S	S	S																	T						T	T				B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	L	K	D	Q	Q	P	G	T	F	L	L	R	F	S	E	S	S	R	E	G	A	I	T	F	T	W	V	E	R	S	N	G	G	E	P	D	F	H	A	V	E	P	Y	T	K	K	E	L	S	A	V	T	F	P	D	I	I	R	N	Y	K	V	M	A	A	E	N	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S		S	T	T								S	S		S	S														S	S									B						T	T	S														T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
Sequence	E	N	P	L	K	Y	L	Y	P	N	I	D	K	D	H	A	F	G	K	Y	Y	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B		T	T	S		B						G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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