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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ghgK_

Fold library idPDB HeaderMoleculeTitle
c3ghgK_PDB header: blood clottingChain: K: PDB Molecule: fibrinogen beta chain;PDBTitle: crystal structure of human fibrinogen


Added to library: Sun Aug 29 12:34:28 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KAPDAGGCLHADPDLGVLCPTGCQLQEALLQQERPIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQK
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Known secondary structure (DSSP)







SSTTS



TTGGGTTTSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RQKQVKDNENVVNEYSSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQKLESDVSAQMEYCRTPC
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Known secondary structure (DSSP) TTTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TVSCNIPVVSGKECEEIIRKGGETSEMYLIQPDSSVKPYRVYCDMNTENGGWTVIQNRQDGSVDFGRKWD
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Known secondary structure (DSSP)






S
SSTT

S

S
SSS


SGGGS

SS
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence PYKQGFGNVATNTDGKNYCGLPGEYWLGNDKISQLTRMGPTELLIEMEDWKGDKVKAHYGGFTVQNEANK
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Known secondary structure (DSSP)

B


SS
SS

SB
S
STSS

SSS


GGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YQISVNKYRGTAGNALMDGASQLMGENRTMTIHNGMFFSTYDRDNDGWLTSDPRKQCSKEDGGGWWYNRC
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Known secondary structure (DSSP) T

SS

TTTT

TTS
TTS

TT
BTTB

SS


S
SSS
TS
SSS
 .........360.........370.........380.........390.........400.
Sequence HAANPNGRYYWGGQYTWDMAKHGTDDGVVWMNWKGSWYSMRKMSMKIRPFF
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Known secondary structure (DSSP)
SB
TTS


TTSB

TTTSTTSS

SS
B
TTB

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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