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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4etpA_

Fold library idPDB HeaderMoleculeTitle
c4etpA_PDB header: motor proteinChain: A: PDB Molecule: kinesin-like protein kar3;PDBTitle: c-terminal motor and motor homology domain of kar3vik1 fused to a2 synthetic heterodimeric coiled coil


Added to library: Sat Jun 30 13:55:51 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGNIRVYLRIRPALKNL
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Known secondary structure (DSSP)

S



TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQSSLDGYNVAI
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Known secondary structure (DSSP) S
S

TT


BTTTTB
SSS
S
TT

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence FAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSSIGLKHE
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Known secondary structure (DSSP) S
TTSS
TTTSTTTTTTT



S



 .........220.........230.........240.........250.........260.........270.........280
Sequence IRHDQETKTTTITNVTSVKLESEEMVEIILKKANRTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNL
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Known secondary structure (DSSP) TTTTTT








TSTTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence VDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKT
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Known secondary structure (DSSP)








SS

TSS
TTTS


GGGSTGGGTSTT
 .........360.........370.........
Sequence LMFVNISPSSSHINETLNSLRFASKVNST
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Known secondary structure (DSSP)

SGGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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