PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3na7A_

Fold library id	PDB Header	Molecule	Title
c3na7A_	PDB header: gene regulation, chaperone	Chain: A: PDB Molecule: hp0958;	PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874

Links to external resources
Added to library: Sat Sep 25 08:57:29 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L G S N T H L K Q L I E I S H L D K E I D S L E P L I R E K R K D L D K A L N D K E A K N K A I L N L E E E K L A L K L Q V S K N E Q T L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D T N A K I A S I Q K K M S E I K S E R E L R S L N I E E D I A K E R S N Q A N R E I E N L Q N E I K R K S E K Q E D L K K E M L E L E K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A L E L E S L V E N E V K N I K E T Q Q I I F K K K E D L V E K T E P K I Y S F Y E R I R R W A K N T S I V T I K K Q A C G G C F I R L N D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
G G G S
B T T B
T T T
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence K I Y T E V L T S G D M I T C P Y C G R I L Y A E G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	G	S	N	T	H	L	K	Q	L	I	E	I	S	H	L	D	K	E	I	D	S	L	E	P	L	I	R	E	K	R	K	D	L	D	K	A	L	N	D	K	E	A	K	N	K	A	I	L	N	L	E	E	E	K	L	A	L	K	L	Q	V	S	K	N	E	Q	T	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	T	N	A	K	I	A	S	I	Q	K	K	M	S	E	I	K	S	E	R	E	L	R	S	L	N	I	E	E	D	I	A	K	E	R	S	N	Q	A	N	R	E	I	E	N	L	Q	N	E	I	K	R	K	S	E	K	Q	E	D	L	K	K	E	M	L	E	L	E	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	L	E	L	E	S	L	V	E	N	E	V	K	N	I	K	E	T	Q	Q	I	I	F	K	K	K	E	D	L	V	E	K	T	E	P	K	I	Y	S	F	Y	E	R	I	R	R	W	A	K	N	T	S	I	V	T	I	K	K	Q	A	C	G	G	C	F	I	R	L	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	S																G	G	G	S					B	T	T	B		T	T	T			B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	K	I	Y	T	E	V	L	T	S	G	D	M	I	T	C	P	Y	C	G	R	I	L	Y	A	E	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S					T	T	T							S