Fold library entry viewer: c3l9oA_

Added to library: Sun Aug 29 03:20:42 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	A	S	K	G	L	T	N	S	E	T	L	Q	V	E	Q	D	G	K	V	R	L	S	H	Q	V	R	H	Q	V	A	L	P	P	N	Y	D	Y	T	P	I	A	E	H	K	R	V	N	E	A	R	T	Y	P	F	T	L	D	P	F	Q	D	T	A	I	S	C	I	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S		S	S	S	S			S	S		S													S	S				S	S	T	T	T	T	T				S		S	S			S	S														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	E	S	V	L	V	S	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	Q	S	L	K	N	K	Q	R	V	I	Y	T	S	P	I	K	A	L	S	N	Q	K	Y	R	E	L	L	A	E	F	G	D	V	G	L	M	T	G	D	I	T	I	N	P	D	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									S	S	S																T	T								S	S															T	S	S						S	S		B				S		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	L	V	M	T	T	E	I	L	R	S	M	L	Y	R	G	S	E	V	M	R	E	V	A	W	V	I	F	D	E	V	H	Y	M	R	D	K	E	R	G	V	V	W	E	E	T	I	I	L	L	P	D	K	V	R	Y	V	F	L	S	A	T	I	P	N	A	M	E	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S												T	G	G	G	T	T	S														S		T	T	S								S		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	W	I	C	K	I	H	S	Q	P	C	H	I	V	Y	T	N	F	R	P	T	P	L	Q	H	Y	L	F	P	A	H	G	D	G	I	Y	L	V	V	D	E	K	S	T	F	R	E	E	N	F	Q	K	A	M	A	S	I	A	K	G	D	I	Y	K	I	V	K	M	I	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		S											S	S									T	T	S	S								T	T	T												T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	K	K	Y	N	P	V	I	V	F	S	F	S	K	R	D	C	E	E	L	A	L	K	M	S	K	L	D	F	N	S	D	A	L	T	K	I	F	N	N	A	I	A	L	L	P	E	T	D	R	E	L	P	Q	I	K	H	I	L	P	L	L	R	R	G	I	G	I	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									S												T		S												G	G	G	S		T						T	T									T						T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	G	L	L	P	I	L	K	E	V	I	E	I	L	F	Q	E	G	F	L	K	V	L	F	A	T	E	T	F	S	I	G	L	N	M	K	T	V	V	F	T	S	V	R	K	W	D	G	Q	Q	F	R	W	V	S	G	G	E	Y	I	Q	M	S	G	R	A	G	R	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S															T									S				S										S		S				S	S	S																	S			S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	D	D	R	G	I	V	I	M	M	I	D	E	K	M	E	P	Q	V	A	K	G	M	V	K	G	Q	A	D	R	L	D	S	A	F	H	L	G	Y	N	M	I	L	N	L	M	R	V	E	G	I	S	P	E	F	M	L	E	H	S	F	F	Q	F	Q	N	V	I	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S																																												S	T	T										S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	P	V	M	E	K	K	L	A	E	L	K	K	D	F	D	G	I	E	V	E	D	E	E	N	V	K	E	Y	H	E	I	E	Q	A	I	K	G	Y	R	E	D	V	R	Q	V	V	T	H	P	A	N	A	L	S	F	L	Q	P	G	R	L	V	E	I	S	V	N	G	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T				T	T																											S										T	T								T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	Y	G	W	G	A	V	V	D	F	A	K	R	I	S	A	V	Y	T	D	H	E	S	Y	I	V	N	V	V	V	N	T	M	Y	I	D	S	P	V	N	L	L	K	P	F	N	P	T	L	P	E	G	I	R	P	A	E	E	S	I	C	A	V	I	P	I	T	L	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	S	S										S	T	T			S				S	S		T	T	T	T			S	G	G	G	S	S			S												S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	K	S	I	G	N	L	R	L	Y	M	P	K	D	I	R	A	S	G	Q	K	E	T	V	G	K	S	L	R	E	V	N	R	R	F	P	D	G	I	P	V	L	D	P	V	K	N	M	K	I	E	D	E	D	F	L	K	L	M	K	K	I	D	V	L	N	T	K	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	T	T	S																			S	S			T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	N	P	L	T	N	S	M	R	L	E	E	L	Y	G	K	Y	S	R	K	H	D	L	H	E	D	M	K	Q	L	K	R	K	I	S	E	Q	A	V	I	Q	L	D	D	L	R	R	R	K	R	V	L	R	R	L	G	F	C	T	P	N	D	I	I	E	L	K	G	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T		S	S																																															T	S		T	T	T				S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	C	E	S	S	G	D	E	L	L	L	T	E	L	I	F	N	G	N	F	N	E	L	K	P	E	Q	A	A	A	L	L	S	C	E	P	L	K	A	M	R	E	I	A	A	K	I	A	K	I	M	K	D	S	K	I	E	V	V	E	K	D	Y	V	E	S	F	R	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T															S	S			T						T																						T	T		S													S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.
Sequence	L	M	E	V	V	Y	E	W	C	R	T	Q	I	C	K	M	T	Y	E	G	S	L	I	R	M	F	K	R	L	E	E	L	V	K	E	L	V	D	I	G	N	S	S	L	K	E	K	M	E	A	V	L	K	L	I	H	R	D	I	V	S	A	G	S	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G	T																		S																									T

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PDB structure

FASTA sequence

Hidden Markov model

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