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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2ocyB_

Fold library idPDB HeaderMoleculeTitle
c2ocyB_PDB header: endocytosis/exocytosisChain: B: PDB Molecule: rab guanine nucleotide exchange factor sec2;PDBTitle: complex of the guanine exchange factor sec2p and the rab2 gtpase sec4p


Added to library: Wed Jan 9 14:59:18 2013
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SXALSTQLIESVDKQSHLEEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIAKE
Predicted secondary structure
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Known secondary structure (DSSP)
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NELRTKAEEEADKLNKEVEDLTASLFDEANNXVADARKEKYAIEILNKRLTEQLREKDTLLDTLTLQLKN
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Known secondary structure (DSSP)
 .........
Sequence LKKVXHSLD
Predicted secondary structure

SS confidence








Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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