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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ojaA_

Fold library idPDB HeaderMoleculeTitle
c3ojaA_PDB header: protein bindingChain: A: PDB Molecule: leucine-rich immune molecule 1;PDBTitle: crystal structure of lrim1/apl1c complex


Added to library: Sat Sep 25 11:40:45 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL
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Known secondary structure (DSSP)


TTS

TTTTTSTTGGG



SS





GGGGTT
TT


TTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence YETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDE
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Known secondary structure (DSSP)
TT
TT



SS
TT



SS






SS


SS


SGGGB
G
 .........150.........160.........170.........180.........190.........200.........210
Sequence GCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEF
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Known secondary structure (DSSP) GGGSS
TTS


GGGGGGGTTT


TTS







TT



SS



GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE
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Known secondary structure (DSSP) GGGTT
S
TTS



TT



TT


TT

B
TT
TSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSTERLECERENQARQREIDALKEQYRTVIDQV
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Known secondary structure (DSSP)


SSTT
TT


S

S


T




 .........360.........370.........380.........390.........400.........410.........420
Sequence TLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVE
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Known secondary structure (DSSP) TTSS




SS


 .........430.........440.........450.........460.........470.........480..
Sequence QQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQNLASQLG
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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