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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1bg1A_

Fold library idPDB HeaderMoleculeTitle
c1bg1A_PDB header: transcription/dnaChain: A: PDB Molecule: protein (transcription factor stat3b);PDBTitle: transcription factor stat3b/dna complex


Added to library: Tue Mar 16 13:36:39 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDSVTRQKMQQLEQMLTALDQMR
Predicted secondary structure

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Known secondary structure (DSSP)


TT




TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKL
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Known secondary structure (DSSP) TTT






 .........150.........160.........170.........180.........190.........200.........210
Sequence EELQQKVSYKGDPIVQHRPMLEERIVELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLLVK
Predicted secondary structure
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Known secondary structure (DSSP) S

TT
TTTTT
TT
TT
TTTTS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FPELNYQLKIKVCIDKDSGDVAALRGSRKFNILGTNTKVMNMEESNNGSLSAEFKHLTLREQRCGNGGRA
Predicted secondary structure
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Known secondary structure (DSSP)
GGGTTT
S
GGGTSSS

S


S


B
TT
STT


SSS



 .........290.........300.........310.........320.........330.........340.........350
Sequence NCDASLIVTEELHLITFETEVYHQGLKIDLETHSLPVVVISNICQMPNAWASILWYNMLTNNPKNVNFFT
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Known secondary structure (DSSP) SGGGTS
GGG

B
TT
S
BSSGGG


S

TTGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence KPPIGTWDQVAEVLSWQFSSTTKRGLSIEQLTTLAEKLLGPGVNYSGCQITWAKFCKENMAGKGFSFWVW
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Known secondary structure (DSSP) S


SS




S
S

TT

TTSB
TT
SSB
 .........430.........440.........450.........460.........470.........480.........490
Sequence LDNIIDLVKKYILALWNEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQI
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Known secondary structure (DSSP) S
SSS


B


TTGGGTTTTTS
TT
B

SS
SS





SSS
SS


 .........500.........510.........520.........530.........540.........550........
Sequence QSVEPYTKQQLNNMSFAEIIMGYKIMDATNILVSPLVYLYPDIPKEEAFGKYCRAAPLKTKFICVTPF
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Known secondary structure (DSSP)




B
GGGGTSS
TTS


B
TTSSB



SSBTTTB
TTTTTGGG













B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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