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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1deqO_

Fold library idPDB HeaderMoleculeTitle
c1deqO_PDB header: blood clottingChain: O: PDB Molecule: fibrinogen (beta chain);PDBTitle: the crystal structure of modified bovine fibrinogen (at ~42 angstrom resolution)


Added to library: Tue Mar 16 12:17:04 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLQDTLVRQERPIRKSIEDLRNTVDSVSRTSSSTFQYITLLKNMWKGRQNQVQDNENVVNEYSSHLEKHQ
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Known secondary structure (DSSP)
TTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LYIDETVKNNIPTKLRVLRSILENLRSKIQKLESDVSTQMEYCRTPCTVTCNIPVVSGKECEKIIRNEGE
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Known secondary structure (DSSP) TTTTTTTTSSSTTTTTTTTSS








S


SSTTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence TSEMYLIQPEDSSKPYRVYCDMKTEKGGWTVIQNRQDGSVDFGRKWDPYKQGFGNIATNAEGKKYCGVPG
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Known secondary structure (DSSP) SSS
SSSSS

SSSTTS


SS

S




ST

S



SS
SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence EYWLGNDRISQLTNMGPTKLLIEMEDWKGDKVTALYEGFTVQNEANKYQLSVSKYKGTAGNALIEGASQL
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Known secondary structure (DSSP)




STGGGS

TTS



TTTT


S
STT

TTTS

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VGENRTMTIHNSMFFSTYDRDNDGWKTTDPRKQCSKEDGGGWWYNRCHAANPNGRYYWGGAYTWDMAKHG
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Known secondary structure (DSSP)
TTT
GGG

BTTB

SS

S

TTS
SS
TT



SSS
SB
SSSB

SSSB

TTSSTTS
 .........360.........370.........380
Sequence TDDGVVWMNWQGSWYSMKKMSKMIRPYFPE
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Known secondary structure (DSSP) S

B

BTTSS
SSB

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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