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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4hpqC_

Fold library idPDB HeaderMoleculeTitle
c4hpqC_PDB header: protein transportChain: C: PDB Molecule: atg17;PDBTitle: crystal structure of the atg17-atg31-atg29 complex


Added to library: Wed Jan 9 19:25:00 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NEAVIEKLLENSRKFLTGAKLICQESNDHLTTTKLRIREWQKFQSKLHFVLDCIQQQTKFLSEILLREGI
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Known secondary structure (DSSP)







 .........80.........90.........100.........110.........120.........130.........140
Sequence GRNLIEEEWSQTVLVRLVNDMKFWQNEITKMMNKLDNITNEIDQQHNSKLGDFISRDSSHILDSKLNEIP
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Known secondary structure (DSSP)












TTTS



SSS


TTTTSS

TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TIRKQVENITRQYQTMLAKVQSQLVESRMKGLRDEFSEEFTNEADQLEQELADFLKSFTDHFDKCSALSS
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Known secondary structure (DSSP)

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RSVSPEDAQNLFEIVERDDKDLAAINSLLQDAAIDVASFVRKVNMLLDERDADKAKMQATLSKLLTELRK
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Known secondary structure (DSSP) TS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence HEEYISVFEGISALIQKFKASCLEDIRQTRNLLDFYANFERSYHNLLKEVKRRKETAAKLSQILKSCETQ
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Known secondary structure (DSSP)
 .........360.........370.........380.........390......
Sequence LEQINTADLRERQMFLLENGNYLPETIWPDEIGSLSPLYTLNYEVR
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Known secondary structure (DSSP) SSSSS
GGGSTTTSS



S








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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