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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ghgI_

Fold library idPDB HeaderMoleculeTitle
c3ghgI_PDB header: blood clottingChain: I: PDB Molecule: fibrinogen gamma chain;PDBTitle: crystal structure of human fibrinogen


Added to library: Wed Jan 9 15:08:25 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VATRDNCCILDERFGSYCPTTCGIADFLSTYQTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPD
Predicted secondary structure


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Known secondary structure (DSSP)


GGGSSS

TTT





TTTTTSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ESSKPNMIDAATLKSRKMLEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKD
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) S
SSS
TTTTSSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence TVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQY
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Known secondary structure (DSSP) S



S
SST

S


TT
SS


TT


SSS
S




 .........220.........230.........240.........250.........260.........270.........280
Sequence KEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYF
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Known secondary structure (DSSP)

B


SS

S


SSTT


TTS




GGGTT

S

 .........290.........300.........310.........320.........330.........340.........350
Sequence AGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQG
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Known secondary structure (DSSP)


TT

TTB



SSSGGGGGGSB
TT


BBTTB


SSSS
TTS
B

SSS
SB
TTSB

SS
 .........360.........370.........380.........390....
Sequence GTYSKASTPNGYDNGIIWATWKTRWYSMKKTTMKIIPFNRLTIG
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Known secondary structure (DSSP) SB

TTTSSSSS

BS
BTTTS
TTB

ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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