1 d1smyc_
100.0
54
Fold: beta and beta-prime subunits of DNA dependent RNA-polymeraseSuperfamily: beta and beta-prime subunits of DNA dependent RNA-polymeraseFamily: RNA-polymerase beta
2 c3iydC_
100.0
58
PDB header: transcription/dnaChain: C: PDB Molecule: dna-directed rna polymerase subunit beta;
PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
3 d1ynjc1
100.0
55
Fold: beta and beta-prime subunits of DNA dependent RNA-polymeraseSuperfamily: beta and beta-prime subunits of DNA dependent RNA-polymeraseFamily: RNA-polymerase beta
4 c2pmzB_
100.0
29
PDB header: translation, transferaseChain: B: PDB Molecule: dna-directed rna polymerase subunit b;
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
5 c3h0gN_
100.0
26
PDB header: transcriptionChain: N: PDB Molecule: dna-directed rna polymerase ii subunit rpb2;
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
6 d1twfb_
100.0
25
Fold: beta and beta-prime subunits of DNA dependent RNA-polymeraseSuperfamily: beta and beta-prime subunits of DNA dependent RNA-polymeraseFamily: RNA-polymerase beta
7 c3mlqD_
100.0
62
PDB header: transferase/transcriptionChain: D: PDB Molecule: dna-directed rna polymerase subunit beta;
PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain
8 c3mlqB_
100.0
63
PDB header: transferase/transcriptionChain: B: PDB Molecule: dna-directed rna polymerase subunit beta;
PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain
9 c3tbiB_
99.9
44
PDB header: transcriptionChain: B: PDB Molecule: dna-directed rna polymerase subunit beta;
PDBTitle: crystal structure of t4 gp33 bound to e. coli rnap beta-flap domain
10 c3ltiA_
99.9
60
PDB header: transferaseChain: A: PDB Molecule: dna-directed rna polymerase subunit beta;
PDBTitle: crystal structure of the escherichia coli rna polymerase beta subunit2 beta2-betai4 domains
11 c3qqcA_
99.2
24
PDB header: transcriptionChain: A: PDB Molecule: dna-directed rna polymerase subunit b, dna-directed rna
PDBTitle: crystal structure of archaeal spt4/5 bound to the rnap clamp domain
12 d1r46a1
47.4
16
Fold: Glycosyl hydrolase domainSuperfamily: Glycosyl hydrolase domainFamily: alpha-Amylases, C-terminal beta-sheet domain
13 d1zq1c1
36.0
42
Fold: GatB/YqeY motifSuperfamily: GatB/YqeY motifFamily: GatB/GatE C-terminal domain-like
14 d1n26a2
31.4
19
Fold: Immunoglobulin-like beta-sandwichSuperfamily: Fibronectin type IIIFamily: Fibronectin type III
15 d1d02a_
30.3
17
Fold: Restriction endonuclease-likeSuperfamily: Restriction endonuclease-likeFamily: Restriction endonuclease MunI
16 d1nbwa1
27.4
14
Fold: The "swivelling" beta/beta/alpha domainSuperfamily: Swiveling domain of dehydratase reactivase alpha subunitFamily: Swiveling domain of dehydratase reactivase alpha subunit
17 d1uj4a2
27.3
24
Fold: Ferredoxin-likeSuperfamily: D-ribose-5-phosphate isomerase (RpiA), lid domainFamily: D-ribose-5-phosphate isomerase (RpiA), lid domain
18 c2gtiA_
26.9
16
PDB header: viral proteinChain: A: PDB Molecule: replicase polyprotein 1ab;
PDBTitle: mutation of mhv coronavirus non-structural protein nsp15 (f307l)
19 d1gm5a4
23.9
20
Fold: P-loop containing nucleoside triphosphate hydrolasesSuperfamily: P-loop containing nucleoside triphosphate hydrolasesFamily: Tandem AAA-ATPase domain
20 c1uj6A_
23.2
15
PDB header: isomeraseChain: A: PDB Molecule: ribose 5-phosphate isomerase;
PDBTitle: crystal structure of thermus thermophilus ribose-5-phosphate isomerase2 complexed with arabinose-5-phosphate
21 d2d0oa1
not modelled
21.9
13
Fold: The "swivelling" beta/beta/alpha domainSuperfamily: Swiveling domain of dehydratase reactivase alpha subunitFamily: Swiveling domain of dehydratase reactivase alpha subunit
22 c3lvwA_
not modelled
21.4
12
PDB header: ligaseChain: A: PDB Molecule: glutamate--cysteine ligase;
PDBTitle: glutathione-inhibited scgcl
23 c3mjhD_
not modelled
21.4
50
PDB header: protein transportChain: D: PDB Molecule: early endosome antigen 1;
PDBTitle: crystal structure of human rab5a in complex with the c2h2 zinc finger2 of eea1
24 c3kdeC_
not modelled
21.2
16
PDB header: dna binding protein/dnaChain: C: PDB Molecule: transposable element p transposase;
PDBTitle: crystal structure of the thap domain from d. melanogaster p-element2 transposase in complex with its natural dna binding site
25 d1lk5a2
not modelled
21.2
12
Fold: Ferredoxin-likeSuperfamily: D-ribose-5-phosphate isomerase (RpiA), lid domainFamily: D-ribose-5-phosphate isomerase (RpiA), lid domain
26 c3cwiA_
not modelled
21.1
22
PDB header: biosynthetic proteinChain: A: PDB Molecule: thiamine-biosynthesis protein this;
PDBTitle: crystal structure of thiamine biosynthesis protein (this)2 from geobacter metallireducens. northeast structural3 genomics consortium target gmr137
27 c2c2lD_
not modelled
20.6
24
PDB header: chaperoneChain: D: PDB Molecule: carboxy terminus of hsp70-interacting protein;
PDBTitle: crystal structure of the chip u-box e3 ubiquitin ligase
28 d1y4oa1
not modelled
20.0
47
Fold: Profilin-likeSuperfamily: Roadblock/LC7 domainFamily: Roadblock/LC7 domain
29 d1ujpa_
not modelled
19.8
26
Fold: TIM beta/alpha-barrelSuperfamily: Ribulose-phoshate binding barrelFamily: Tryptophan biosynthesis enzymes
30 c2db3D_
not modelled
19.8
43
PDB header: hydrolase/rnaChain: D: PDB Molecule: atp-dependent rna helicase vasa;
PDBTitle: structural basis for rna unwinding by the dead-box protein2 drosophila vasa
31 d2eyqa5
not modelled
19.4
16
Fold: P-loop containing nucleoside triphosphate hydrolasesSuperfamily: P-loop containing nucleoside triphosphate hydrolasesFamily: Tandem AAA-ATPase domain
32 c2q8nB_
not modelled
19.0
18
PDB header: isomeraseChain: B: PDB Molecule: glucose-6-phosphate isomerase;
PDBTitle: crystal structure of glucose-6-phosphate isomerase (ec2 5.3.1.9) (tm1385) from thermotoga maritima at 1.82 a3 resolution
33 c1nbwA_
not modelled
18.6
16
PDB header: hydrolaseChain: A: PDB Molecule: glycerol dehydratase reactivase alpha subunit;
PDBTitle: glycerol dehydratase reactivase
34 d1jbja1
not modelled
18.2
13
Fold: Immunoglobulin-like beta-sandwichSuperfamily: ImmunoglobulinFamily: I set domains
35 c2pjmA_
not modelled
17.7
21
PDB header: isomeraseChain: A: PDB Molecule: ribose-5-phosphate isomerase a;
PDBTitle: structure of ribose 5-phosphate isomerase a from2 methanocaldococcus jannaschii
36 d1xiwb_
not modelled
16.9
13
Fold: Immunoglobulin-like beta-sandwichSuperfamily: ImmunoglobulinFamily: I set domains
37 d1cf2o2
not modelled
16.6
34
Fold: FwdE/GAPDH domain-likeSuperfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainFamily: GAPDH-like
38 d1zcea1
not modelled
16.6
17
Fold: PUA domain-likeSuperfamily: PUA domain-likeFamily: Atu2648/PH1033-like
39 d1prtc1
not modelled
15.8
19
Fold: OB-foldSuperfamily: Bacterial enterotoxinsFamily: Bacterial AB5 toxins, B-subunits
40 d1prtb1
not modelled
15.5
19
Fold: OB-foldSuperfamily: Bacterial enterotoxinsFamily: Bacterial AB5 toxins, B-subunits
41 c2fyuE_
not modelled
15.5
43
PDB header: oxidoreductaseChain: E: PDB Molecule: ubiquinol-cytochrome c reductase iron-sulfur subunit,
PDBTitle: crystal structure of bovine heart mitochondrial bc1 with jg1442 inhibitor
42 d1sy6a1
not modelled
15.5
13
Fold: Immunoglobulin-like beta-sandwichSuperfamily: ImmunoglobulinFamily: I set domains
43 c3l7oB_
not modelled
15.4
15
PDB header: isomeraseChain: B: PDB Molecule: ribose-5-phosphate isomerase a;
PDBTitle: crystal structure of ribose-5-phosphate isomerase a from streptococcus2 mutans ua159
44 c2g5iB_
not modelled
14.9
17
PDB header: ligaseChain: B: PDB Molecule: aspartyl/glutamyl-trna(asn/gln) amidotransferase
PDBTitle: structure of trna-dependent amidotransferase gatcab2 complexed with adp-alf4
45 d1xmwa2
not modelled
14.8
13
Fold: Immunoglobulin-like beta-sandwichSuperfamily: ImmunoglobulinFamily: I set domains
46 c1bcpH_
not modelled
13.7
19
PDB header: toxinChain: H: PDB Molecule: pertussis toxin;
PDBTitle: binary complex of pertussis toxin and atp
47 c3bxzA_
not modelled
13.2
33
PDB header: transport proteinChain: A: PDB Molecule: preprotein translocase subunit seca;
PDBTitle: crystal structure of the isolated dead motor domains from2 escherichia coli seca
48 d1m5ha1
not modelled
12.4
42
Fold: Ferredoxin-likeSuperfamily: Formylmethanofuran:tetrahydromethanopterin formyltransferaseFamily: Formylmethanofuran:tetrahydromethanopterin formyltransferase
49 d1tf5a4
not modelled
12.2
33
Fold: P-loop containing nucleoside triphosphate hydrolasesSuperfamily: P-loop containing nucleoside triphosphate hydrolasesFamily: Tandem AAA-ATPase domain
50 d1m0sa2
not modelled
12.2
19
Fold: Ferredoxin-likeSuperfamily: D-ribose-5-phosphate isomerase (RpiA), lid domainFamily: D-ribose-5-phosphate isomerase (RpiA), lid domain
51 d1m5sa1
not modelled
12.1
42
Fold: Ferredoxin-likeSuperfamily: Formylmethanofuran:tetrahydromethanopterin formyltransferaseFamily: Formylmethanofuran:tetrahydromethanopterin formyltransferase
52 d1ftra1
not modelled
12.1
46
Fold: Ferredoxin-likeSuperfamily: Formylmethanofuran:tetrahydromethanopterin formyltransferaseFamily: Formylmethanofuran:tetrahydromethanopterin formyltransferase
53 c2uv0G_
not modelled
12.0
25
PDB header: transcriptionChain: G: PDB Molecule: transcriptional activator protein lasr;
PDBTitle: structure of the p. aeruginosa lasr ligand-binding domain2 bound to its autoinducer
54 d2d6fc2
not modelled
11.8
46
Fold: DCoH-likeSuperfamily: GAD domain-likeFamily: GAD domain
55 c3c4iA_
not modelled
11.8
13
PDB header: dna binding proteinChain: A: PDB Molecule: dna-binding protein hu homolog;
PDBTitle: crystal structure analysis of n terminal region containing the2 dimerization domain and dna binding domain of hu protein(histone like3 protein-dna binding) from mycobacterium tuberculosis [h37rv]
56 c1gjjA_
not modelled
11.6
33
PDB header: membrane proteinChain: A: PDB Molecule: lap2;
PDBTitle: n-terminal constant region of the nuclear envelope protein2 lap2
57 d1dcza_
not modelled
11.5
33
Fold: Barrel-sandwich hybridSuperfamily: Single hybrid motifFamily: Biotinyl/lipoyl-carrier proteins and domains
58 c3u5cI_
not modelled
11.3
22
PDB header: ribosomeChain: I: PDB Molecule: 40s ribosomal protein s8-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome a
59 c1pd7B_
not modelled
11.0
60
PDB header: transcriptionChain: B: PDB Molecule: mad1;
PDBTitle: extended sid of mad1 bound to the pah2 domain of msin3b
60 d2gtia2
not modelled
10.8
10
Fold: EndoU-likeSuperfamily: EndoU-likeFamily: Nsp15 C-terminal domain-like
61 c3dlaD_
not modelled
10.5
14
PDB header: ligaseChain: D: PDB Molecule: glutamine-dependent nad(+) synthetase;
PDBTitle: x-ray crystal structure of glutamine-dependent nad+ synthetase from2 mycobacterium tuberculosis bound to naad+ and don
62 c1jbjA_
not modelled
10.4
18
PDB header: immune systemChain: A: PDB Molecule: cd3 epsilon and gamma ectodomain fragment
PDBTitle: cd3 epsilon and gamma ectodomain fragment complex in single-2 chain construct
63 c6paxA_
not modelled
10.4
22
PDB header: gene regulation/dnaChain: A: PDB Molecule: homeobox protein pax-6;
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
64 c2vb0A_
not modelled
10.1
21
PDB header: hydrolaseChain: A: PDB Molecule: polyprotein 3bcd;
PDBTitle: crystal structure of coxsackievirus b3 proteinase 3c
65 d1flja_
not modelled
9.8
25
Fold: Carbonic anhydraseSuperfamily: Carbonic anhydraseFamily: Carbonic anhydrase
66 c1lk5C_
not modelled
9.8
14
PDB header: isomeraseChain: C: PDB Molecule: d-ribose-5-phosphate isomerase;
PDBTitle: structure of the d-ribose-5-phosphate isomerase from2 pyrococcus horikoshii
67 c3qp1A_
not modelled
9.7
30
PDB header: transcriptionChain: A: PDB Molecule: cvir transcriptional regulator;
PDBTitle: crystal structure of cvir ligand-binding domain bound to the native2 ligand c6-hsl
68 d1aola_
not modelled
9.7
23
Fold: ENV polyprotein, receptor-binding domainSuperfamily: ENV polyprotein, receptor-binding domainFamily: ENV polyprotein, receptor-binding domain
69 c1m1jA_
not modelled
9.7
50
PDB header: blood clottingChain: A: PDB Molecule: fibrinogen alpha subunit;
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
70 d1o8ba2
not modelled
9.5
19
Fold: Ferredoxin-likeSuperfamily: D-ribose-5-phosphate isomerase (RpiA), lid domainFamily: D-ribose-5-phosphate isomerase (RpiA), lid domain
71 c2f1mA_
not modelled
9.4
20
PDB header: transport proteinChain: A: PDB Molecule: acriflavine resistance protein a;
PDBTitle: conformational flexibility in the multidrug efflux system protein acra
72 c2nu9E_
not modelled
9.3
21
PDB header: ligaseChain: E: PDB Molecule: succinyl-coa synthetase beta chain;
PDBTitle: c123at mutant of e. coli succinyl-coa synthetase2 orthorhombic crystal form
73 d1wgma_
not modelled
9.2
11
Fold: RING/U-boxSuperfamily: RING/U-boxFamily: U-box
74 d1px5a1
not modelled
9.1
28
Fold: PAP/OAS1 substrate-binding domainSuperfamily: PAP/OAS1 substrate-binding domainFamily: 2'-5'-oligoadenylate synthetase 1, OAS1, second domain
75 d2f3na1
not modelled
9.1
13
Fold: SAM domain-likeSuperfamily: SAM/Pointed domainFamily: SAM (sterile alpha motif) domain
76 d1b7go2
not modelled
9.0
23
Fold: FwdE/GAPDH domain-likeSuperfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainFamily: GAPDH-like
77 c2p5zX_
not modelled
8.9
17
PDB header: structural genomics, unknown functionChain: X: PDB Molecule: type vi secretion system component;
PDBTitle: the e. coli c3393 protein is a component of the type vi secretion2 system and exhibits structural similarity to t4 bacteriophage tail3 proteins gp27 and gp5
78 d1y5ic1
not modelled
8.9
15
Fold: Heme-binding four-helical bundleSuperfamily: Respiratory nitrate reductase 1 gamma chainFamily: Respiratory nitrate reductase 1 gamma chain
79 c2oy7A_
not modelled
8.8
11
PDB header: membrane proteinChain: A: PDB Molecule: outer surface protein a;
PDBTitle: the crystal structure of ospa mutant
80 d2hz5a1
not modelled
8.8
47
Fold: Profilin-likeSuperfamily: Roadblock/LC7 domainFamily: Roadblock/LC7 domain
81 d1jqna_
not modelled
8.7
44
Fold: TIM beta/alpha-barrelSuperfamily: Phosphoenolpyruvate/pyruvate domainFamily: Phosphoenolpyruvate carboxylase
82 d2p5zx2
not modelled
8.6
17
Fold: Phage tail proteinsSuperfamily: Phage tail proteinsFamily: Baseplate protein-like
83 d2pxyd2
not modelled
8.6
44
Fold: MHC antigen-recognition domainSuperfamily: MHC antigen-recognition domainFamily: MHC antigen-recognition domain
84 d1h59b_
not modelled
8.5
38
Fold: Knottins (small inhibitors, toxins, lectins)Superfamily: Growth factor receptor domainFamily: Growth factor receptor domain
85 d2guja1
not modelled
8.5
25
Fold: Phage tail proteinsSuperfamily: Phage tail proteinsFamily: XkdM-like
86 c1m0sA_
not modelled
8.5
16
PDB header: isomeraseChain: A: PDB Molecule: ribose-5-phosphate isomerase a;
PDBTitle: northeast structural genomics consortium (nesg id ir21)
87 c2j8qB_
not modelled
8.5
40
PDB header: nuclear proteinChain: B: PDB Molecule: cleavage and polyadenylation specificity factor 5;
PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion.
88 c1lkzB_
not modelled
8.3
14
PDB header: isomeraseChain: B: PDB Molecule: ribose 5-phosphate isomerase a;
PDBTitle: crystal structure of d-ribose-5-phosphate isomerase (rpia)2 from escherichia coli.
89 c3ghgD_
not modelled
8.3
33
PDB header: blood clottingChain: D: PDB Molecule: fibrinogen alpha chain;
PDBTitle: crystal structure of human fibrinogen
90 d2pwwa1
not modelled
8.3
8
Fold: TBP-likeSuperfamily: YugN-likeFamily: YugN-like
91 d1m6ia3
not modelled
8.2
43
Fold: CO dehydrogenase flavoprotein C-domain-likeSuperfamily: FAD/NAD-linked reductases, dimerisation (C-terminal) domainFamily: FAD/NAD-linked reductases, dimerisation (C-terminal) domain
92 c2aujD_
not modelled
8.1
33
PDB header: transferaseChain: D: PDB Molecule: dna-directed rna polymerase beta' chain;
PDBTitle: structure of thermus aquaticus rna polymerase beta'-subunit2 insert
93 d1ooha_
not modelled
8.1
33
Fold: EF Hand-likeSuperfamily: Insect pheromone/odorant-binding proteinsFamily: Insect pheromone/odorant-binding proteins
94 d1pfva2
not modelled
8.0
40
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Nucleotidylyl transferaseFamily: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
95 d1u1ia1
not modelled
8.0
29
Fold: NAD(P)-binding Rossmann-fold domainsSuperfamily: NAD(P)-binding Rossmann-fold domainsFamily: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
96 d1k8ba_
not modelled
8.0
36
Fold: Ribosome binding domain-likeSuperfamily: Translation initiation factor 2 beta, aIF2beta, N-terminal domainFamily: Translation initiation factor 2 beta, aIF2beta, N-terminal domain
97 c1p84E_
not modelled
8.0
43
PDB header: oxidoreductaseChain: E: PDB Molecule: ubiquinol-cytochrome c reductase iron-sulfur
PDBTitle: hdbt inhibited yeast cytochrome bc1 complex
98 c2kkpA_
not modelled
8.0
36
PDB header: dna binding proteinChain: A: PDB Molecule: phage integrase;
PDBTitle: solution nmr structure of the phage integrase sam-like2 domain from moth 1796 from moorella thermoacetica.3 northeast structural genomics consortium target mtr39k4 (residues 64-171).
99 d1uoua3
not modelled
7.9
16
Fold: alpha/beta-HammerheadSuperfamily: Pyrimidine nucleoside phosphorylase C-terminal domainFamily: Pyrimidine nucleoside phosphorylase C-terminal domain