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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3kdeC_

Fold library idPDB HeaderMoleculeTitle
c3kdeC_PDB header: dna binding protein/dnaChain: C: PDB Molecule: transposable element p transposase;PDBTitle: crystal structure of the thap domain from d. melanogaster p-element2 transposase in complex with its natural dna binding site


Added to library: Sat Aug 28 23:05:23 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKYCKFCCKAVTGVKLIHVPKCAIKRKLWEQSLGCSLGENSQICDTHFNDSQWKAAKGQTFKRRRLNADA
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Known secondary structure (DSSP)

TTTT

SS


SSTS


TT
GGGS
GGGB







SS

B
TT
 ....
Sequence VPSK
Predicted secondary structure



SS confidence



Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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