PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2pjmA_

Fold library id	PDB Header	Molecule	Title
c2pjmA_	PDB header: isomerase	Chain: A: PDB Molecule: ribose-5-phosphate isomerase a;	PDBTitle: structure of ribose 5-phosphate isomerase a from2 methanocaldococcus jannaschii

Links to external resources
Added to library: Tue Mar 16 12:12:05 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N E D L K L K V A K E A V K L V K D G M V I G L G T G S T A A L F I R E L G N R I R E E E L T V F G I P T S F E A K M L A M Q Y E I P L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
S T
S S T T
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T L D E Y D V D I A F D G A D E V E E T T L F L I K G G G G C H T Q E K I V D Y N A N E F V V L V D E S K L V K K L G E K F P I P V E V I P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S T T T
T T S
S S G G G S S T T S S S
G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S A Y R V V I R A L S E M G G E A V I R L G D R K R G P V I T D N G N M I I D V F M N I D D A I E L E K E I N N I P G V V E N G I F T K V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T T
B
S S S S S B
B
T T S
S
T S T T S
S

. . . . . . . . . 220 . . . . .

Sequence K V L V G T K K G V K T L K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	E	D	L	K	L	K	V	A	K	E	A	V	K	L	V	K	D	G	M	V	I	G	L	G	T	G	S	T	A	A	L	F	I	R	E	L	G	N	R	I	R	E	E	E	L	T	V	F	G	I	P	T	S	F	E	A	K	M	L	A	M	Q	Y	E	I	P	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														G	G	G			T	T								S																		T								S	S										T	T			B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	L	D	E	Y	D	V	D	I	A	F	D	G	A	D	E	V	E	E	T	T	L	F	L	I	K	G	G	G	G	C	H	T	Q	E	K	I	V	D	Y	N	A	N	E	F	V	V	L	V	D	E	S	K	L	V	K	K	L	G	E	K	F	P	I	P	V	E	V	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T				S							S				T	T	T							T	T	S												S	S								G	G	G			S	S	T	T	S	S	S								G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	A	Y	R	V	V	I	R	A	L	S	E	M	G	G	E	A	V	I	R	L	G	D	R	K	R	G	P	V	I	T	D	N	G	N	M	I	I	D	V	F	M	N	I	D	D	A	I	E	L	E	K	E	I	N	N	I	P	G	V	V	E	N	G	I	F	T	K	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G											T	T							B		S	S	S	S	S	B		B		T	T	S											S											T	S	T	T					S						S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	K	V	L	V	G	T	K	K	G	V	K	T	L	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T