Fold library entry viewer: d1jqna_

Added to library: Tue Mar 16 14:40:09 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	Y	S	A	L	R	S	N	V	S	M	L	G	K	V	L	G	E	T	I	K	D	A	L	G	E	H	I	L	E	R	V	E	T	I	R	K	L	S	K	S	S	R	A	G	N	D	A	N	R	Q	E	L	L	T	T	L	Q	N	L	S	N	D	E	L	L	P	V	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T	T																		T	T														T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	F	S	Q	F	L	N	L	A	N	T	A	E	Q	Y	H	S	I	S	P	K	G	E	A	A	S	N	P	E	V	I	A	R	T	L	R	K	L	K	N	Q	P	E	L	S	E	D	T	I	K	K	A	V	E	S	L	S	L	E	L	V	L	T	A	H	P	T	E	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	T	T		T	T		T												T		T	T												T											T	T			B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	R	T	L	I	H	K	M	V	E	V	N	A	C	L	K	Q	L	D	N	K	D	I	A	D	Y	E	H	N	Q	L	M	R	R	L	R	Q	L	I	A	Q	S	W	H	T	D	E	I	R	K	L	R	P	S	P	V	D	E	A	K	W	G	F	A	V	V	E	N	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																	S		S	S																										B		S	S																		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	W	Q	G	V	P	N	Y	L	R	E	L	N	E	Q	L	E	E	N	L	G	Y	K	L	P	V	E	F	V	P	V	R	F	T	S	W	M	G	G	D	R	D	G	N	P	N	V	T	A	D	I	T	R	H	V	L	L	L	S	R	W	K	A	T	D	L	F	L	K	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	S					T	T										T	T	T	B		T	T		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	V	L	V	S	E	L	S	M	V	E	A	T	P	E	L	L	A	L	V	G	E	E	G	A	A	E	P	Y	R	Y	L	M	K	N	L	R	S	R	L	M	A	T	Q	A	W	L	E	A	R	L	K	G	E	E	L	P	K	P	E	G	L	L	T	Q	N	E	E	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T	S	S	S	S																									T	T							S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	P	L	Y	A	C	Y	Q	S	L	Q	A	C	G	M	G	I	I	A	N	G	D	L	L	D	T	L	R	R	V	K	C	F	G	V	P	L	V	R	I	D	I	R	Q	E	S	T	R	H	T	E	A	L	G	E	L	T	R	Y	L	G	I	G	D	Y	E	S	W	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T						T	T												T	T	T	T	S	S																							T	S			G	G	G	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	D	K	Q	A	F	L	I	R	E	L	N	S	K	R	P	L	L	P	R	N	W	Q	P	S	A	E	T	R	E	V	L	D	T	C	Q	V	I	A	E	A	P	Q	G	S	I	A	A	Y	V	I	S	M	A	K	T	P	S	D	V	L	A	V	H	L	L	L	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S			S		S	S																				S		T	T	S								T			S													T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	I	G	F	A	M	P	V	A	P	L	F	E	T	L	D	D	L	N	N	A	N	D	V	M	T	Q	L	L	N	I	D	W	Y	R	G	L	I	Q	G	K	Q	M	V	M	I	G	Y	S	D	S	A	K	D	A	G	V	M	A	A	S	W	A	Q	Y	Q	A	Q	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S										S																	S							T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	I	K	T	C	E	K	A	G	I	E	L	T	L	F	H	G	R	G	G	S	I	G	R	G	G	A	P	A	H	A	A	L	L	S	Q	P	P	G	S	L	K	G	G	L	R	V	T	E	Q	G	E	M	I	R	F	K	Y	G	L	P	E	I	T	V	S	S	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T									S	S	T	G	G	G	S											T	S		T	T	T	T	T	T								G	G	G						S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Y	T	G	A	I	L	E	A	N	L	L	P	P	P	E	P	K	E	S	W	R	R	I	M	D	E	L	S	V	I	S	C	D	V	Y	R	G	Y	V	R	E	N	K	D	F	V	P	Y	F	R	S	A	T	P	E	Q	E	L	G	K	L	P	L	G	S	R	P	G	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S																													T	T		T	T									S								S	S		S	S					G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	S	L	R	A	I	P	W	I	F	A	W	T	Q	N	R	L	M	L	P	A	W	L	G	A	G	T	A	L	Q	K	V	V	E	D	G	K	Q	S	E	L	E	A	M	C	R	D	W	P	F	F	S	T	R	L	G	M	L	E	M	V	F	A	K	A	D	L	W	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S												T	T			G	G	G	T	T	T										T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	Y	Y	D	Q	R	L	V	D	K	A	L	W	P	L	G	K	E	L	R	N	L	Q	E	E	D	I	K	V	V	L	A	I	A	N	D	S	H	L	M	A	D	L	P	W	I	A	E	S	I	Q	L	R	N	I	Y	T	D	P	L	N	V	L	Q	A	E	L	L	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		T	T	T																						T	T		S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Sequence	S	R	Q	A	E	K	E	G	Q	E	P	D	P	R	V	E	Q	A	L	M	V	T	I	A	G	I	A	A	G	M	R	N	T	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T

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PDB structure

FASTA sequence

Hidden Markov model

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