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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ltiA_

Fold library idPDB HeaderMoleculeTitle
c3ltiA_PDB header: transferaseChain: A: PDB Molecule: dna-directed rna polymerase subunit beta;PDBTitle: crystal structure of the escherichia coli rna polymerase beta subunit2 beta2-betai4 domains


Added to library: Thu Oct 28 12:58:44 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence XSPGVFFDSDVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVI
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Known secondary structure (DSSP)






SBS


TTS
TT


TTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence FEIRDNKLQXELVPERLRGETASFDIEANGVYVEGRRITARHIRQLEKDDVKLIEVPVEYIAGVVADYID
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Known secondary structure (DSSP) TT

GGGGTT
B
SS
B





B


B

TT





B


 .........150.........160.........170.........180.........190.........200.........210
Sequence ESTGELICAANXELSLDLLALSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRXXRPGE
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Known secondary structure (DSSP) TTT


TT





TTTT




SSSS





SSTTS
 .........220.........230.........240.........250.........260.........270....
Sequence PPTREAAESLFENLFFSEDRYDLSAVGRXFNRSLLREEIEGSGILSDDIIDVXLIDIRNGGEVD
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Known secondary structure (DSSP)


S
TTT
B


TTTTT
S
S


SS










Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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