Fold library entry viewer: d1ynjc1

Added to library: Tue Mar 16 14:11:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	I	K	R	F	G	R	I	R	E	V	I	P	L	P	P	L	T	E	I	Q	V	E	S	Y	K	K	A	L	Q	A	D	V	P	P	E	K	R	E	N	V	G	I	Q	A	A	F	K	E	T	F	P	I	E	E	G	D	K	G	K	G	G	L	V	L	D	F	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S					S	T									T	T			T	T	S		T	T				S	S								T	T		B				S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	R	I	G	D	P	P	F	S	Q	D	E	C	R	E	K	D	L	T	Y	Q	A	P	L	Y	A	R	L	Q	L	I	H	K	D	T	G	L	I	K	E	D	E	V	F	L	G	H	L	P	L	M	T	E	D	G	S	F	I	I	N	G	A	D	R	V	I	V	S	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S									T													B			S	S				B			S												S	S	S					S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	R	S	P	G	V	Y	F	T	P	D	P	A	R	P	G	R	Y	I	A	S	I	I	P	L	P	K	R	G	P	W	I	D	L	E	V	E	A	S	G	V	V	T	M	K	V	N	K	R	K	F	P	L	V	L	L	L	R	V	L	G	Y	D	Q	E	T	L	V	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S						B		T	T	S	T	T		B							S	T	T	S	S									T	T								T	T												T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	S	A	Y	G	D	L	V	Q	G	L	L	D	E	A	V	L	A	M	R	P	E	E	A	M	V	R	L	F	T	L	L	R	P	G	D	P	P	K	K	D	K	A	L	A	Y	L	F	G	L	L	A	D	P	K	R	Y	D	L	G	E	A	G	R	Y	K	A	E	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S										T	T	S															S	S	S				S	T	T					T	T	T	S	S	S	S	S	S			S		S	S	S	T	T							T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	G	V	G	L	S	G	R	T	L	V	R	F	E	D	G	E	F	K	D	E	V	F	L	P	T	L	R	Y	L	F	A	L	T	A	G	V	P	G	H	E	V	D	D	I	D	H	L	G	N	R	R	I	R	T	V	G	E	L	M	A	D	Q	F	R	V	G	L	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S				S	S	S	S	B		B	T	T	T	B		B		S	S										T	T	S	S			T	T						T	T	S	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	A	R	G	V	R	E	R	M	V	M	G	S	P	D	T	L	T	P	A	K	L	V	N	S	R	P	L	E	A	A	L	R	E	F	F	S	R	S	Q	L	S	Q	F	K	D	E	T	N	P	L	S	S	L	R	H	K	R	R	I	S	A	L	G	P	G	G	L	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S		T	T	T			T	T	T	S			S	S														T	T							S	S									T				S		S	S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	R	A	G	F	D	V	R	D	V	H	R	T	H	Y	G	R	I	C	P	V	E	T	P	E	G	A	N	I	G	L	I	T	S	L	A	A	Y	A	R	V	D	A	L	G	F	I	R	T	P	Y	R	R	V	K	N	G	V	V	T	E	E	V	V	Y	M	T	A	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S	T	T	T	S			T	T		T	T	T	B		S	S				S	S	S	S	T	T	T				B		T	T					T	T	S				B							T	T									B		S	S	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	D	R	Y	T	I	A	Q	A	N	T	P	L	E	G	D	R	I	A	T	D	R	V	V	A	R	R	R	G	E	P	V	I	V	A	P	E	E	V	E	F	M	D	V	S	P	K	Q	V	F	S	L	N	T	N	L	I	P	F	L	E	H	D	D	A	N	R	A	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S					S	S	S			B	T	T	B				S	S						T	T							G	G	G						S		G	G	G	G	S		T	T	G	G	G		T	T	G	G	G	B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	S	N	M	Q	T	Q	A	V	P	L	I	R	A	Q	A	P	V	V	M	T	G	L	E	E	R	V	V	R	D	S	L	A	A	L	Y	A	E	E	D	G	E	V	V	K	V	D	G	T	R	I	A	V	R	Y	E	D	G	R	L	V	E	H	P	L	R	R	Y	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	T	T	S					T	T		B			S				S										T		S				S	S	S								S	S							S	S	S										S	B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	N	Q	G	T	A	F	D	Q	R	P	R	V	R	V	G	Q	R	V	K	K	G	D	L	L	A	D	G	P	A	S	E	E	G	F	L	A	L	G	Q	N	V	L	V	A	I	M	P	F	D	G	Y	N	F	E	D	A	I	V	I	S	E	E	L	L	K	R	D	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			B								S	S		B			S	S							S	S			T	T				S									S			S	S	T	T		T	T						T					T	T		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	S	I	H	I	E	R	Y	E	I	E	A	R	D	T	K	L	G	P	E	R	I	T	R	D	I	P	H	L	S	E	A	A	L	R	D	L	D	E	E	G	I	V	R	I	G	A	E	V	K	P	G	D	I	L	V	G	R	T	S	F	K	G	E	Q	E	P	S	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T				B			S			T	T			T	T	T	G	G	G	B		T	T	S	B	B		T	T					T	T			S	B			B	B									T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	R	L	L	R	S	I	F	G	E	K	A	R	D	V	K	D	T	S	L	R	V	P	P	G	E	G	G	I	V	V	G	R	L	R	L	R	R	G	D	P	G	V	E	L	K	P	G	V	R	E	V	V	R	V	F	V	A	Q	K	R	K	L	Q	V	G	D	K	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T						S		B								T	T													S	S	S	T	T					T	T																	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	N	R	H	G	N	K	G	V	V	A	K	I	L	P	V	E	D	M	P	H	L	P	D	G	T	P	V	D	V	I	L	N	P	L	G	V	P	S	R	M	N	L	G	Q	I	L	E	T	H	L	G	L	A	G	Y	F	L	G	Q	R	Y	I	S	P	V	F	D	G	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T												T	T	S	S		B		T	T	S		B		S					G	G	G	T	T	T	S		B	T																T							T	T	T	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	E	P	E	I	K	E	L	L	A	E	A	F	N	L	Y	F	G	K	R	Q	G	E	G	F	G	V	D	K	R	E	K	E	V	L	A	R	A	E	K	L	G	L	V	S	P	G	K	S	P	E	E	Q	L	K	E	L	F	D	L	G	K	V	V	L	Y	D	G	R	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T																	T	T		S		T	T	S												T	T					B		S	S	S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	E	P	F	E	G	P	I	V	V	G	Q	M	F	I	M	K	L	Y	H	M	V	E	D	K	M	H	A	R	S	T	G	P	Y	S	L	I	T	Q	Q	P	L	G	G	K	A	Q	F	G	G	Q	R	F	G	E	M	E	V	W	A	L	E	A	Y	G	A	A	H	T	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B		S	S													S			T	T	T	S					S	S			B		T	T	T		S	B				S	S	S																	T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.
Sequence	E	M	L	T	I	K	S	D	D	I	E	G	R	N	A	A	Y	Q	A	I	I	K	G	E	D	V	P	E	P	S	V	P	E	S	F	R	V	L	V	K	E	L	Q	A	L	A	L	D	V	Q	T	L	D	E	K	D	N	P	V	D	I	F	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T	T													T	T	T								S													T	T	S						B		T	T	S		B			S