PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1m0sA_

Fold library id	PDB Header	Molecule	Title
c1m0sA_	PDB header: isomerase	Chain: A: PDB Molecule: ribose-5-phosphate isomerase a;	PDBTitle: northeast structural genomics consortium (nesg id ir21)

Links to external resources
Added to library: Tue Mar 16 12:30:43 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M N Q L E M K K L A A Q A A L Q Y V K A D R I V G V G S G S T V N C F I E A L G T I K D K I Q G A V A A S K E S E E L L R K Q G I E V F N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T S
S T T G G G S
S S T T
B
G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N D V S S L D I Y V D G A D E I N P Q K M M I K G G G A A L T R E K I V A A L A K K F I C I V D S S K Q V D V L G S T F P L P V E V I P M A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G
S
S
T T S
T T S
G G G B
S S T T S S S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R S Q V G R K L A A L G G S P E Y R E G V V T D N G N V I L D V H N F S I L N P V E I E K E L N N V A G V V T N G I F A L R G A D V V I V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T S
S
S
T S T T S
T T
S

. . . . . . . . .

Sequence T P E G A K V I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	N	Q	L	E	M	K	K	L	A	A	Q	A	A	L	Q	Y	V	K	A	D	R	I	V	G	V	G	S	G	S	T	V	N	C	F	I	E	A	L	G	T	I	K	D	K	I	Q	G	A	V	A	A	S	K	E	S	E	E	L	L	R	K	Q	G	I	E	V	F	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															G	G	G			T	T	S							S												T	T	G	G	G	S						S	S										T	T			B			G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	D	V	S	S	L	D	I	Y	V	D	G	A	D	E	I	N	P	Q	K	M	M	I	K	G	G	G	A	A	L	T	R	E	K	I	V	A	A	L	A	K	K	F	I	C	I	V	D	S	S	K	Q	V	D	V	L	G	S	T	F	P	L	P	V	E	V	I	P	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S										S				T	T	S						T	T	S																					G	G	G	B		S	S	T	T	S	S	S								G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	S	Q	V	G	R	K	L	A	A	L	G	G	S	P	E	Y	R	E	G	V	V	T	D	N	G	N	V	I	L	D	V	H	N	F	S	I	L	N	P	V	E	I	E	K	E	L	N	N	V	A	G	V	V	T	N	G	I	F	A	L	R	G	A	D	V	V	I	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T							T	T				T	T	S								S				S											T	S	T	T					S				T	T			S
	.	.	.	.	.	.	.	.	.
Sequence	T	P	E	G	A	K	V	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T