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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1aola_

Fold library idFoldSuperfamilyFamily
d1aola_ENV polyprotein, receptor-binding domainENV polyprotein, receptor-binding domainENV polyprotein, receptor-binding domain


Added to library: Tue Mar 16 14:27:25 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVYNITWEVTNGDRETVWAISGNHPLWTWWPVLTPDLCMLALSGPPHWGLEYQAPYSSPPGPPCCSGSSG
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Known secondary structure (DSSP)

TTS
TT




B

BTT

GGGS
TT

TT



S

BTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SSAGCSRDCDEPLTSLTPRCNTAWNRLKLDQVTHKSSEGFYVCPGSHRPREAKSCGGPDSFYCASWGCET
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Known secondary structure (DSSP)

TT
BGGGGS

TT

SSSSS
TT


TT

TT

GGGTT
SSTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence TGRVYWKPSSSWDYITVDNNLTTSQAVQVCKDNKWCNPLAIQFTNAGKQVTSWTTGHYWGLRLYVSGRDP
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Known secondary structure (DSSP) STT



SS
SSS
TTS


B


GGGT


TTT

 .........220........
Sequence GLTFGIRLRYQNLGPRVP
Predicted secondary structure








SS confidence

















Known secondary structure (DSSP)

GGG
-


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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