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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c2c2lD_

Fold library idPDB HeaderMoleculeTitle
c2c2lD_PDB header: chaperoneChain: D: PDB Molecule: carboxy terminus of hsp70-interacting protein;PDBTitle: crystal structure of the chip u-box e3 ubiquitin ligase


Added to library: Tue Mar 16 13:52:51 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ
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Known secondary structure (DSSP)


TTT

TT
TTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELH
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Known secondary structure (DSSP)
TTTTT
TT


TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLC
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Known secondary structure (DSSP) TTTTT
TTT

S




GGGB
 .........220.........230.........240.........250.........260.........270.........280
Sequence GKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFISENGWVED
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Known secondary structure (DSSP)
TTT
SB
SS
TTS
TTTTT
SB
TTT

B

GGG

T
GGGS
 .
Sequence Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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