PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2f1mA_

Fold library id	PDB Header	Molecule	Title
c2f1mA_	PDB header: transport protein	Chain: A: PDB Molecule: acriflavine resistance protein a;	PDBTitle: conformational flexibility in the multidrug efflux system2 protein acra

Links to external resources
Added to library: Tue Mar 16 13:02:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T E L P G R T S A Y R I A E V R P Q V S G I I L K R N F K E G S D I E A G V S L Y Q I D P A T Y Q A T Y D S A K G D L A K A Q A A A N I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S
T T
T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q L T V N R Y Q K L L G T Q Y I S K Q E Y D Q A L A D A Q Q A N A A V T A A K A A V E T A R I N L A Y T K V T S P I S G R I G K S N V T E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S T T
T T
S S
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A L V Q N G Q A T A L A T V Q Q L D P I Y V D V T Q S S N D X K A K V S L I T S D G I K F P Q D G T L E F S D V T V D Q T T G S I T L R A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
S
S S T T T
S S S
B
S S
B S S S
S S S

. . . . . . . . . 220 . . . . . . . . .

Sequence F P N P D H T X X P G X F V R A R L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	E	L	P	G	R	T	S	A	Y	R	I	A	E	V	R	P	Q	V	S	G	I	I	L	K	R	N	F	K	E	G	S	D	I	E	A	G	V	S	L	Y	Q	I	D	P	A	T	Y	Q	A	T	Y	D	S	A	K	G	D	L	A	K	A	Q	A	A	A	N	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S								S	S									S		T	T					T	T	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	L	T	V	N	R	Y	Q	K	L	L	G	T	Q	Y	I	S	K	Q	E	Y	D	Q	A	L	A	D	A	Q	Q	A	N	A	A	V	T	A	A	K	A	A	V	E	T	A	R	I	N	L	A	Y	T	K	V	T	S	P	I	S	G	R	I	G	K	S	N	V	T	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T	S	T	T																																				T	T					S	S								S	S		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	L	V	Q	N	G	Q	A	T	A	L	A	T	V	Q	Q	L	D	P	I	Y	V	D	V	T	Q	S	S	N	D	X	K	A	K	V	S	L	I	T	S	D	G	I	K	F	P	Q	D	G	T	L	E	F	S	D	V	T	V	D	Q	T	T	G	S	I	T	L	R	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		S	S		S							S	S									T	T	T										S	S	S		B		S	S		B			S	S	S						S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Sequence	F	P	N	P	D	H	T	X	X	P	G	X	F	V	R	A	R	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T					S	S