Email l.a.kelley@imperial.ac.uk Description P77658 Date Thu Jan 5 12:31:27 GMT 2012 Unique Job ID c3f68563378f4f9d

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1c1gA_ 99.0 6 PDB header:contractile protein Chain: A: PDB Molecule:tropomyosin; PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form 2 c2ch7A_ 98.4 10 PDB header:chemotaxis Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima 3 c2oevA_ 97.6 7 PDB header:protein transport Chain: A: PDB Molecule:programmed cell death 6-interacting protein; PDBTitle: crystal structure of alix/aip1 4 c2efrB_ 97.3 12 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution 5 c2oexB_ 97.1 8 PDB header:protein transport Chain: B: PDB Molecule:programmed cell death 6-interacting protein; PDBTitle: structure of alix/aip1 v domain 6 c1ciiA_ 96.9 12 PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia 7 c3ojaB_ 96.3 10 PDB header:protein binding Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex 8 c1yvlB_ 95.3 9 PDB header:signaling protein Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: structure of unphosphorylated stat1 9 c2d3eD_ 95.3 13 PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin 10 c3u59C_ 94.9 6 PDB header:contractile protein Chain: C: PDB Molecule:tropomyosin beta chain; PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta 11 c2fxmB_ 94.6 8 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform; PDBTitle: structure of the human beta-myosin s2 fragment 12 c2b9cA_ 94.5 9 PDB header:contractile protein Chain: A: PDB Molecule:striated-muscle alpha tropomyosin; PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin 13 c1bg1A_ 94.5 13 PDB header:transcription/dna Chain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex 14 c3l9oA_ 94.2 8 PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome 15 c3g67A_ 94.0 13 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima 16 c3na7A_ 93.7 10 PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874 17 c1bf5A_ 93.7 8 PDB header:gene regulation/dna Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: tyrosine phosphorylated stat-1/dna complex 18 c3ol1A_ 93.7 8 PDB header:structural protein Chain: A: PDB Molecule:vimentin; PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b 19 c3o0zD_ 93.7 11 PDB header:transferase Chain: D: PDB Molecule:rho-associated protein kinase 1; PDBTitle: crystal structure of a coiled-coil domain from human rock i 20 c3cwgA_ 93.5 11 PDB header:transcription Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: unphosphorylated mouse stat3 core fragment 21 c3ghgK_ not modelled 93.4 10 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 22 c4a55B_ not modelled 93.0 5 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: crystal structure of p110alpha in complex with ish2 of p85alpha and2 the inhibitor pik-108 23 c2gl2B_ not modelled 92.7 13 PDB header:cell adhesion Chain: B: PDB Molecule:adhesion a; PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada 24 c1deqO_ not modelled 92.2 12 PDB header: PDB COMPND: 25 c1qu7A_ not modelled 90.9 12 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor 26 c2y3aB_ not modelled 89.5 8 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta; PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941 27 c1y4cA_ not modelled 89.1 13 PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp 28 c1ei3E_ not modelled 88.6 6 PDB header: PDB COMPND: 29 c2v66C_ not modelled 87.9 9 PDB header:structural protein Chain: C: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c 30 c2wpqA_ not modelled 86.8 8 PDB header:membrane protein Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment; PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion) 31 c1deqF_ not modelled 85.9 11 PDB header: PDB COMPND: 32 c2dq3A_ not modelled 83.9 16 PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of aq_298 33 c1deqD_ not modelled 83.1 8 PDB header: PDB COMPND: 34 c2v1yB_ not modelled 80.9 8 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: structure of a phosphoinositide 3-kinase alpha adaptor-2 binding domain (abd) in a complex with the ish2 domain3 from p85 alpha 35 c2v71A_ not modelled 80.2 13 PDB header:nuclear protein Chain: A: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: coiled-coil region of nudel 36 c1hciB_ not modelled 80.0 8 PDB header:triple-helix coiled coil Chain: B: PDB Molecule:alpha-actinin 2; PDBTitle: crystal structure of the rod domain of alpha-actinin 37 c1ei3C_ not modelled 79.0 8 PDB header: PDB COMPND: 38 c3dtpA_ not modelled 78.9 10 PDB header:contractile protein Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map 39 c3u1aC_ not modelled 77.0 6 PDB header:contractile protein Chain: C: PDB Molecule:smooth muscle tropomyosin alpha; PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha 40 c2e7sM_ not modelled 75.8 14 PDB header:endocytosis/exocytosis Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the yeast sec2p gef domain 41 c3ojaA_ not modelled 73.8 10 PDB header:protein binding Chain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex 42 c1jchC_ not modelled 73.6 9 PDB header:ribosome inhibitor, hydrolase Chain: C: PDB Molecule:colicin e3; PDBTitle: crystal structure of colicin e3 in complex with its immunity protein 43 c3hnwB_ not modelled 72.6 7 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 44 c2i1jA_ not modelled 69.9 9 PDB header:cell adhesion, membrane protein Chain: A: PDB Molecule:moesin; PDBTitle: moesin from spodoptera frugiperda at 2.1 angstroms resolution 45 c1l8dB_ not modelled 69.4 13 PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: rad50 coiled-coil zn hook 46 c3a7pB_ not modelled 69.4 15 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 47 c2qihA_ not modelled 66.3 13 PDB header:cell adhesion Chain: A: PDB Molecule:protein uspa1; PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis 48 c3hizB_ not modelled 64.6 8 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha 49 c3iv1F_ not modelled 56.7 11 PDB header:hydrolase Chain: F: PDB Molecule:tumor susceptibility gene 101 protein; PDBTitle: coiled-coil domain of tumor susceptibility gene 101 50 c3r6nA_ not modelled 56.2 7 PDB header:cell adhesion Chain: A: PDB Molecule:desmoplakin; PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain 51 c2rd0B_ not modelled 53.3 9 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: structure of a human p110alpha/p85alpha complex 52 c3qh9A_ not modelled 49.8 16 PDB header:structural protein Chain: A: PDB Molecule:liprin-beta-2; PDBTitle: human liprin-beta2 coiled-coil 53 c2eqbC_ not modelled 43.9 12 PDB header:endocytosis/exocytosis Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex 54 c3layF_ not modelled 42.0 14 PDB header:metal binding protein Chain: F: PDB Molecule:zinc resistance-associated protein; PDBTitle: alpha-helical barrel formed by the decamer of the zinc resistance-2 associated protein (stm4172) from salmonella enterica subsp. enterica3 serovar typhimurium str. lt2 55 c2jeeA_ not modelled 38.6 12 PDB header:cell cycle Chain: A: PDB Molecule:yiiu; PDBTitle: xray structure of e. coli yiiu 56 c1ic2B_ not modelled 34.7 9 PDB header:contractile protein Chain: B: PDB Molecule:tropomyosin alpha chain, skeletal muscle; PDBTitle: deciphering the design of the tropomyosin molecule 57 c2v4hA_ not modelled 32.9 18 PDB header:transcription Chain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cc2-lz domain - 1d5 darpin complex 58 c2xdjF_ not modelled 32.8 10 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 59 c3ipkA_ not modelled 30.1 11 PDB header:cell adhesion Chain: A: PDB Molecule:agi/ii; PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans 60 c1sjjB_ not modelled 29.7 10 PDB header:contractile protein Chain: B: PDB Molecule:actinin; PDBTitle: cryo-em structure of chicken gizzard smooth muscle alpha-2 actinin 61 c2no2A_ not modelled 29.4 10 PDB header:cell adhesion Chain: A: PDB Molecule:huntingtin-interacting protein 1; PDBTitle: crystal structure of the dllrkn-containing coiled-coil2 domain of huntingtin-interacting protein 1 62 d1seta1 not modelled 28.2 11 Fold:Long alpha-hairpin Superfamily:tRNA-binding arm Family:Seryl-tRNA synthetase (SerRS) 63 c3m9bK_ not modelled 24.8 5 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 64 c3n4xB_ not modelled 22.4 8 PDB header:replication Chain: B: PDB Molecule:monopolin complex subunit csm1; PDBTitle: structure of csm1 full-length 65 c1ci6A_ not modelled 22.0 14 PDB header:transcription Chain: A: PDB Molecule:transcription factor atf-4; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 66 c3qo8A_ not modelled 21.7 14 PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of seryl-trna synthetase from candida albicans 67 c1gd2G_ not modelled 21.3 10 PDB header:transcription/dna Chain: G: PDB Molecule:transcription factor pap1; PDBTitle: crystal structure of bzip transcription factor pap1 bound2 to dna 68 c1gk4A_ not modelled 20.4 8 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2) 69 c3q0xA_ not modelled 18.8 13 PDB header:structural protein Chain: A: PDB Molecule:centriole protein; PDBTitle: n-terminal coiled-coil dimer domain of c. reinhardtii sas-6 homolog2 bld12p 70 d2ap3a1 not modelled 17.9 7 Fold:Four-helical up-and-down bundle Superfamily:MW0975(SA0943)-like Family:MW0975(SA0943)-like 71 c1x8yA_ not modelled 17.6 11 PDB header:structural protein Chain: A: PDB Molecule:lamin a/c; PDBTitle: human lamin coil 2b 72 c2wt7B_ not modelled 16.7 14 PDB header:transcription Chain: B: PDB Molecule:transcription factor mafb; PDBTitle: crystal structure of the bzip heterodimeric complex2 mafb:cfos bound to dna 73 c1wt6B_ not modelled 16.5 20 PDB header:transferase Chain: B: PDB Molecule:myotonin-protein kinase; PDBTitle: coiled-coil domain of dmpk 74 c2zvnF_ not modelled 15.8 17 PDB header:signaling protein/transcription Chain: F: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cozi domain incomplex with diubiquitin in p2121212 space group 75 c2x7aB_ not modelled 15.5 5 PDB header:immune system Chain: B: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: structural basis of hiv-1 tethering to membranes by the2 bst2-tetherin ectodomain 76 c2bsgA_ not modelled 15.5 9 PDB header:viral protein Chain: A: PDB Molecule:fibritin; PDBTitle: the modeled structure of fibritin (gpwac) of bacteriophage2 t4 based on cryo-em reconstruction of the extended tail of3 bacteriophage t4 77 c2pmsD_ not modelled 15.5 11 PDB header:metal transport, hydrolase Chain: D: PDB Molecule:pneumococcal surface protein a (pspa); PDBTitle: crystal structure of the complex of human lactoferrin n-lobe and2 lactoferrin-binding domain of pneumococcal surface protein a 78 c1fosF_ not modelled 15.4 10 PDB header:transcription/dna Chain: F: PDB Molecule:c-jun proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 79 c2ke4A_ not modelled 15.4 12 PDB header:membrane protein Chain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: the nmr structure of the tc10 and cdc42 interacting domain2 of cip4 80 c3batB_ not modelled 15.2 14 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, striated muscle/general PDBTitle: crystal structure of the n-terminal region of the scallop2 myosin rod, monoclinic (p21) form 81 c3cvfA_ not modelled 14.8 18 PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3 82 c1n73C_ not modelled 14.6 6 PDB header:blood clotting Chain: C: PDB Molecule:fibrin gamma chain; PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide 83 c2hpcF_ not modelled 13.3 9 PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen, gamma polypeptide; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide. 84 c1t2kD_ not modelled 11.4 10 PDB header:transcription/dna Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2; PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna 85 c2p22C_ not modelled 11.2 15 PDB header:transport protein Chain: C: PDB Molecule:protein srn2; PDBTitle: structure of the yeast escrt-i heterotetramer core 86 c1g8xB_ not modelled 10.9 8 PDB header:structural protein Chain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3; PDBTitle: structure of a genetically engineered molecular motor 87 c3cveC_ not modelled 10.7 17 PDB header:signaling protein Chain: C: PDB Molecule:homer protein homolog 1; PDBTitle: crystal structure of the carboxy terminus of homer1 88 c1yv0I_ not modelled 10.4 8 PDB header:contractile protein Chain: I: PDB Molecule:troponin i, fast skeletal muscle; PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 free state 89 c1junB_ not modelled 10.4 11 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 90 c3mkxC_ not modelled 9.9 13 PDB header:antiviral protein Chain: C: PDB Molecule:bone marrow stromal antigen 2; PDBTitle: crystal structure of bst2/tetherin 91 c3m06F_ not modelled 9.6 10 PDB header:protein binding Chain: F: PDB Molecule:tnf receptor-associated factor 2; PDBTitle: crystal structure of traf2 92 c1fosE_ not modelled 9.2 13 PDB header:transcription/dna Chain: E: PDB Molecule:p55-c-fos proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 93 c1u4qB_ not modelled 9.1 12 PDB header:structural protein Chain: B: PDB Molecule:spectrin alpha chain, brain; PDBTitle: crystal structure of repeats 15, 16 and 17 of chicken brain2 alpha spectrin 94 c1ru7B_ not modelled 9.0 15 PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin; PDBTitle: 1934 human h1 hemagglutinin 95 c2xgjA_ not modelled 8.8 18 PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance 96 c2e43A_ not modelled 8.7 11 PDB header:transcription/dna Chain: A: PDB Molecule:ccaat/enhancer-binding protein beta; PDBTitle: crystal structure of c/ebpbeta bzip homodimer k269a mutant2 bound to a high affinity dna fragment 97 c3lssA_ not modelled 8.6 9 PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp 98 c1ik9B_ not modelled 8.0 8 PDB header:gene regulation/ligase Chain: B: PDB Molecule:dna repair protein xrcc4; PDBTitle: crystal structure of a xrcc4-dna ligase iv complex 99 c2w6aB_ not modelled 7.9 11 PDB header:signaling protein Chain: B: PDB Molecule:arf gtpase-activating protein git1; PDBTitle: x-ray structure of the dimeric git1 coiled-coil domain