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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2hpcF_

Fold library idPDB HeaderMoleculeTitle
c2hpcF_PDB header: blood clottingChain: F: PDB Molecule: fibrinogen, gamma polypeptide;PDBTitle: crystal structure of fragment d from human fibrinogen2 complexed with gly-pro-arg-pro-amide.


Added to library: Tue Mar 16 12:55:19 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGA
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Known secondary structure (DSSP)




TT
TTTS
S



S



S


SSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNE
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Known secondary structure (DSSP)
S


TT
SS

TT


SS

S








SSS




 .........150.........160.........170.........180.........190.........200.........210
Sequence KIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSD
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Known secondary structure (DSSP) SSSS



TTS
B


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GGGTT









SS


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SS
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWAT
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Known secondary structure (DSSP) TTTSB
TT


TTB

SSSSS
TTTTTTS

SSS
SB
TTSB

TTS


TTT
SSSS

BS
BTT
 .........290.........300
Sequence WKTRWYSMKKTTMKIIPFNR
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Known secondary structure (DSSP) TS
SS


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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