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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1n73C_

Fold library idPDB HeaderMoleculeTitle
c1n73C_PDB header: blood clottingChain: C: PDB Molecule: fibrin gamma chain;PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand:2 gly-his-arg-pro-amide


Added to library: Tue Mar 16 13:09:29 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KTVQKILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTCSRSCQDTTANKISPITGK
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Known secondary structure (DSSP)
ST
S



TTGGG
BS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DCQQVVDNGGKDSGLYYIKPLKAKQPFLVFCEIENGNGWTVIQHRHDGSVNFTRDWVSYREGFGYLAPTL
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Known secondary structure (DSSP) STT

SS

SS
SS
TTSSS
S








SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TTEFWLGNEKIHLLTGQQAYRLRIDLTDWENTHRYADYGHFKLTPESDEYRLFYSMYLDGDAGNAFDGFD
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Known secondary structure (DSSP)
S


S

TT

T


GGG



S
SS

TTB


 .........220.........230.........240.........250.........260.........270.........280
Sequence FGDDPQDKFYTTHLGMLFSTPERDNDKYEGSCAEQDGSGWWMNRCHAGHLNGKYYFGGNYRKTDVEFPYD
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Known secondary structure (DSSP)
SSSTTTB
TT


BBTTB

SSSSS
TS
B

SSS
SB
TTSB

TTSB



SSS

S
 .........290.........300.........310.........320..
Sequence DGIIWATWHDRWYSLKMTTMKLLPMGRDLSGHGGQQQSKGNS
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Known secondary structure (DSSP)
B

BTTTS
TTB

SSSS


TT

SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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