PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2pmsD_

Fold library id	PDB Header	Molecule	Title
c2pmsD_	PDB header: metal transport, hydrolase	Chain: D: PDB Molecule: pneumococcal surface protein a (pspa);	PDBTitle: crystal structure of the complex of human lactoferrin n-2 lobe and lactoferrin-binding domain of pneumococcal3 surface protein a

Links to external resources
Added to library: Tue Mar 16 14:09:55 2010

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Sequence G S H M D A E E V A P Q A K I A E L E N Q V H R L E Q E L K E I D E A P L Q S K L D A K K A K L S K L E E L S D K I D E L D A E I A K L E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . .

Sequence Q L K A A E E E D Y F K E G L E K T I A A K K A E L E K T E A D L K K A V N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	H	M	D	A	E	E	V	A	P	Q	A	K	I	A	E	L	E	N	Q	V	H	R	L	E	Q	E	L	K	E	I	D	E	A	P	L	Q	S	K	L	D	A	K	K	A	K	L	S	K	L	E	E	L	S	D	K	I	D	E	L	D	A	E	I	A	K	L	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Sequence	Q	L	K	A	A	E	E	E	D	Y	F	K	E	G	L	E	K	T	I	A	A	K	K	A	E	L	E	K	T	E	A	D	L	K	K	A	V	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																					T