Fold library entry viewer: c1sjjB_

Added to library: Tue Mar 16 12:23:35 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	D	P	A	W	E	K	Q	Q	R	K	T	F	T	A	W	C	N	S	H	L	R	K	A	G	T	Q	I	E	N	I	E	E	D	F	R	D	G	L	K	L	M	L	L	L	E	V	I	S	G	E	R	L	A	K	P	E	R	G	K	M	R	V	H	K	I	S	N	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T	T																S						S	S	T	T	T	T										T	T	T	T						S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	A	L	D	F	I	A	S	K	G	V	K	L	V	S	I	G	A	E	E	I	V	D	G	N	V	K	M	T	L	G	M	I	W	T	I	I	L	R	F	A	I	Q	D	I	S	V	E	E	T	S	A	K	E	G	L	L	L	W	Y	Q	R	K	T	A	P	Y	K	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T				T	T			S					T	T																	S						T	T		S		T													T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	I	Q	N	F	H	I	S	W	K	D	G	L	G	F	C	A	L	I	H	R	H	R	P	E	L	I	D	Y	G	K	L	R	K	D	D	P	L	T	N	L	N	T	A	F	D	V	A	E	K	Y	L	D	I	P	K	M	L	D	A	E	D	I	V	G	T	A	R	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	G	G	G	T	T	S												G	G	G							T	T				G	G	G	T	T									T	T						S						T	S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	K	A	I	M	T	Y	V	S	S	F	Y	H	A	F	S	G	A	Q	K	A	E	T	A	A	N	R	I	C	K	V	L	A	V	N	Q	E	N	E	Q	L	M	E	D	Y	E	K	L	A	S	D	L	L	E	W	I	R	R	T	I	P	W	L	E	N	R	A	P	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	G	G	G	T	T	T																					S																																		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	M	Q	A	M	Q	Q	K	L	E	D	F	R	D	Y	R	R	L	H	K	P	P	K	V	Q	E	K	C	Q	L	E	I	N	F	N	T	L	Q	T	K	L	R	L	S	N	R	P	A	F	M	P	S	E	G	K	M	V	S	D	I	N	N	A	W	G	G	L	E	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																		T																						T	T	T	T	T							S	S	T	T		T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	K	G	Y	E	E	W	L	L	N	E	I	R	R	L	E	R	L	D	H	L	A	E	K	F	R	Q	K	A	S	I	H	E	S	W	T	D	G	K	E	A	M	L	Q	Q	K	D	Y	E	T	A	T	L	S	E	I	K	A	L	L	K	K	H	E	A	F	E	S	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																																T	T	T	T						T	S		T	T	T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	A	H	Q	D	R	V	E	Q	I	A	A	I	A	Q	E	L	N	E	L	D	Y	Y	D	S	P	S	V	N	A	R	C	Q	K	I	C	D	Q	W	D	N	L	G	A	L	T	Q	K	R	R	E	A	L	E	R	T	E	K	L	L	E	T	I	D	Q	L	Y	L	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																	T	T	T		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	K	R	A	A	P	F	N	N	W	M	E	G	A	M	E	D	L	Q	D	T	F	I	V	H	T	I	E	E	I	Q	G	L	T	T	A	H	E	Q	F	K	A	T	L	P	D	A	D	K	E	R	Q	A	I	L	G	I	H	N	E	V	S	K	I	V	Q	T	Y	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T	T										T	T						S	S																	T																								T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	M	A	G	T	N	P	Y	T	T	I	T	P	Q	E	I	N	G	K	W	E	H	V	R	Q	L	V	P	R	R	D	Q	A	L	M	E	E	H	A	R	Q	Q	Q	N	E	R	L	R	K	Q	F	G	A	Q	A	N	V	I	G	P	W	I	Q	T	K	M	E	E	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S			S	S		S																													T	T																													T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	I	S	I	E	M	H	G	T	L	E	D	Q	L	N	H	L	R	Q	Y	E	K	S	I	V	N	Y	K	P	K	I	D	Q	L	E	G	D	H	Q	Q	I	Q	E	A	L	I	F	D	N	K	H	T	N	Y	T	M	E	H	I	R	V	G	W	E	Q	L	L	T	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T		S	S	S	S	S																		T															T	T	T					S	S		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	R	T	I	N	E	V	E	N	Q	I	L	T	R	D	A	K	G	I	S	Q	E	Q	M	N	E	F	R	A	S	F	N	H	F	D	R	K	K	T	G	M	M	D	C	E	D	F	R	A	C	L	I	S	M	G	Y	N	M	G	E	A	E	F	A	R	I	M	S	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			T	T	T		S																	S	S	S	S	S															T				S	T	T	T					G	G	G	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	P	N	R	M	G	V	V	T	F	Q	A	F	I	D	F	M	S	R	E	T	A	D	T	D	T	A	D	Q	V	M	A	S	F	K	I	L	A	G	D	K	N	Y	I	T	V	D	E	L	R	R	E	L	P	P	D	Q	A	E	Y	C	I	A	R	M	A	P	Y	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S																		T	T	S		T	T												S	S		S											S		T	T	T						T	T	S					S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Sequence	R	D	A	V	P	G	A	L	D	Y	M	S	F	S	T	A	L	Y	G	E	S	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				T	T				S					T	T	S				T	T

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PDB structure

FASTA sequence

Hidden Markov model

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