1 c2owoA_
100.0
100
PDB header: ligase/dnaChain: A: PDB Molecule: dna ligase;PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate
2 c1v9pB_
100.0
46
PDB header: ligaseChain: B: PDB Molecule: dna ligase;PDBTitle: crystal structure of nad+-dependent dna ligase
3 c1dgsB_
100.0
45
PDB header: ligaseChain: B: PDB Molecule: dna ligase;PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis
4 c3pn1A_
100.0
62
PDB header: ligase/ligase inhibitorChain: A: PDB Molecule: dna ligase;PDBTitle: novel bacterial nad+-dependent dna ligase inhibitors with broad2 spectrum potency and antibacterial efficacy in vivo
5 d1ta8a_
100.0
47
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: Adenylation domain of NAD+-dependent DNA ligase6 c3jslA_
100.0
45
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: crystal structure of the adenylation domain of nad+-2 dependent dna ligase from staphylococcus aureus
7 d1b04a_
100.0
50
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: Adenylation domain of NAD+-dependent DNA ligase8 d1v9pa3
100.0
48
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: Adenylation domain of NAD+-dependent DNA ligase9 c1zauA_
100.0
45
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: adenylation domain of nad+ dependent dna ligase from2 m.tuberculosis
10 d1dgsa3
100.0
46
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: Adenylation domain of NAD+-dependent DNA ligase11 c3bacA_
100.0
62
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: structural basis for the inhibition of bacterial nad+2 dependent dna ligase
12 d1dgsa1
100.0
40
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: NAD+-dependent DNA ligase, domain 313 d1dgsa2
100.0
50
Fold: OB-foldSuperfamily: Nucleic acid-binding proteinsFamily: DNA ligase/mRNA capping enzyme postcatalytic domain14 d1x9na3
99.7
18
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: ATP-dependent DNA ligase catalytic domain15 c2ebuA_
99.7
38
PDB header: replicationChain: A: PDB Molecule: replication factor c subunit 1;PDBTitle: solution structure of the brct domain from human2 replication factor c large subunit 1
16 d1l7ba_
99.6
48
Fold: BRCT domainSuperfamily: BRCT domainFamily: DNA ligase17 c2cokA_
99.3
24
PDB header: transferaseChain: A: PDB Molecule: poly [adp-ribose] polymerase-1;PDBTitle: solution structure of brct domain of poly(adp-ribose)2 polymerase-1
18 d2a1jb1
99.2
30
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: Hef domain-like19 c3gdeA_
99.2
23
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: the closed conformation of atp-dependent dna ligase from2 archaeoglobus fulgidus
20 c2hivA_
99.2
19
PDB header: ligaseChain: A: PDB Molecule: thermostable dna ligase;PDBTitle: atp-dependent dna ligase from s. solfataricus
21 c3l2pA_
not modelled
99.0
17
PDB header: ligase/dnaChain: A: PDB Molecule: dna ligase 3;PDBTitle: human dna ligase iii recognizes dna ends by dynamic switching between2 two dna bound states
22 d1x2ia1
not modelled
99.0
27
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: Hef domain-like23 d2bgwa1
not modelled
98.9
29
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: Hef domain-like24 c2cfmA_
not modelled
98.9
20
PDB header: ligaseChain: A: PDB Molecule: thermostable dna ligase;PDBTitle: atp-dependent dna ligase from pyrococcus furiosus
25 c2vugB_
not modelled
98.9
19
PDB header: ligaseChain: B: PDB Molecule: pab1020;PDBTitle: the structure of an archaeal homodimeric rna ligase
26 c1x9nA_
not modelled
98.8
19
PDB header: ligase/dnaChain: A: PDB Molecule: dna ligase i;PDBTitle: crystal structure of human dna ligase i bound to 5'-adenylated, nicked2 dna
27 c2d8mA_
not modelled
98.7
24
PDB header: dna binding proteinChain: A: PDB Molecule: dna-repair protein xrcc1;PDBTitle: solution structure of the first brct domain of dna-repair2 protein xrcc1
28 c1kftA_
not modelled
98.6
32
PDB header: dna binding proteinChain: A: PDB Molecule: excinuclease abc subunit c;PDBTitle: solution structure of the c-terminal domain of uvrc from e-2 coli
29 d1kfta_
not modelled
98.6
32
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: Excinuclease UvrC C-terminal domain30 c3ef0A_
not modelled
98.6
21
PDB header: hydrolaseChain: A: PDB Molecule: rna polymerase ii subunit a c-terminal domainPDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase
31 c3qwuA_
not modelled
98.5
18
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: putative atp-dependent dna ligase from aquifex aeolicus.
32 c3l3eA_
not modelled
98.5
19
PDB header: cell cycleChain: A: PDB Molecule: dna topoisomerase 2-binding protein 1;PDBTitle: crystal structure of the sixth brct domain of human topbp1
33 c2xnkA_
not modelled
98.5
17
PDB header: isomeraseChain: A: PDB Molecule: dna topoisomerase 2-binding protein 1;PDBTitle: structure and function of the rad9-binding region of the dna damage2 checkpoint adaptor topbp1
34 d1fvia2
not modelled
98.4
16
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: ATP-dependent DNA ligase catalytic domain35 c1p8lA_
not modelled
98.4
15
PDB header: ligaseChain: A: PDB Molecule: pbcv-1 dna ligase;PDBTitle: new crystal structure of chlorella virus dna ligase-adenylate
36 c2couA_
not modelled
98.4
11
PDB header: cell cycleChain: A: PDB Molecule: ect2 protein;PDBTitle: solution structure of the second brct domain of epithelial2 cell transforming 2
37 c2nrzB_
not modelled
98.4
27
PDB header: hydrolaseChain: B: PDB Molecule: uvrabc system protein c;PDBTitle: crystal structure of the c-terminal half of uvrc bound to2 its catalytic divalent cation
38 c3ef1A_
not modelled
98.3
23
PDB header: hydrolaseChain: A: PDB Molecule: rna polymerase ii subunit a c-terminal domainPDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase
39 c3c1zA_
not modelled
98.3
25
PDB header: dna binding proteinChain: A: PDB Molecule: dna integrity scanning protein disa;PDBTitle: structure of the ligand-free form of a bacterial dna damage2 sensor protein
40 d1cdza_
not modelled
98.3
14
Fold: BRCT domainSuperfamily: BRCT domainFamily: DNA-repair protein XRCC141 c2e2wA_
not modelled
98.3
17
PDB header: ligaseChain: A: PDB Molecule: dna ligase 4;PDBTitle: solution structure of the first brct domain of human dna2 ligase iv
42 d1wf6a_
not modelled
98.2
14
Fold: BRCT domainSuperfamily: BRCT domainFamily: DNA topoisomerase II binding protein 1, TopBP143 c3ktfB_
not modelled
98.2
19
PDB header: cell cycleChain: B: PDB Molecule: microcephalin;PDBTitle: structure of the n-terminal brct domain of human2 microcephalin (mcph1).
44 c2bhnD_
not modelled
98.2
26
PDB header: hydrolaseChain: D: PDB Molecule: xpf endonuclease;PDBTitle: xpf from aeropyrum pernix
45 c3ii6Y_
not modelled
98.1
19
PDB header: ligase/dna binding proteinChain: Y: PDB Molecule: dna ligase 4;PDBTitle: structure of human xrcc4 in complex with the tandem brct2 domains of dna ligaseiv.
46 d1kzyc1
not modelled
98.1
14
Fold: BRCT domainSuperfamily: BRCT domainFamily: 53BP147 d2i1qa1
not modelled
98.1
18
Fold: SAM domain-likeSuperfamily: Rad51 N-terminal domain-likeFamily: DNA repair protein Rad51, N-terminal domain48 d2aq0a1
not modelled
98.1
19
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: Hef domain-like49 d1t15a2
not modelled
98.0
21
Fold: BRCT domainSuperfamily: BRCT domainFamily: BRCT domain50 c1a0iA_
not modelled
98.0
16
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: atp-dependent dna ligase from bacteriophage t7 complex with2 atp
51 d1a0ia2
not modelled
98.0
16
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: ATP-dependent DNA ligase catalytic domain52 c1vs0A_
not modelled
98.0
18
PDB header: ligaseChain: A: PDB Molecule: putative dna ligase-like protein rv0938/mt0965;PDBTitle: crystal structure of the ligase domain from m. tuberculosis ligd at2 2.4a
53 c1kzyD_
not modelled
97.9
14
PDB header: dna binding protein, protein bindingChain: D: PDB Molecule: tumor suppressor p53-binding protein 1;PDBTitle: crystal structure of the 53bp1 brct region complexed to2 tumor suppressor p53
54 c2ebwA_
not modelled
97.9
19
PDB header: transferaseChain: A: PDB Molecule: dna repair protein rev1;PDBTitle: solution structure of the brct domain from human dna repair2 protein rev1
55 d1pzna1
not modelled
97.9
32
Fold: SAM domain-likeSuperfamily: Rad51 N-terminal domain-likeFamily: DNA repair protein Rad51, N-terminal domain56 c2vxcA_
not modelled
97.8
15
PDB header: cell cycleChain: A: PDB Molecule: dna repair protein rhp9;PDBTitle: structure of the crb2-brct2 domain complex with2 phosphopeptide.
57 d1l0ba1
not modelled
97.8
13
Fold: BRCT domainSuperfamily: BRCT domainFamily: BRCT domain58 c3l40A_
not modelled
97.7
19
PDB header: cell cycleChain: A: PDB Molecule: brct-containing protein 1;PDBTitle: crystal structure of s. pombe brc1 brct5-brct6 domains
59 d1szpa1
not modelled
97.7
21
Fold: SAM domain-likeSuperfamily: Rad51 N-terminal domain-likeFamily: DNA repair protein Rad51, N-terminal domain60 c2r1zB_
not modelled
97.6
19
PDB header: antitumor proteinChain: B: PDB Molecule: brca1-associated ring domain protein 1;PDBTitle: crystal structure of the bard1 brct repeat
61 c3al3A_
not modelled
97.6
18
PDB header: dna binding protein/protein bindingChain: A: PDB Molecule: dna topoisomerase 2-binding protein 1;PDBTitle: crystal structure of topbp1 brct7/8-bach1 peptide complex
62 c1b22A_
not modelled
97.5
15
PDB header: dna binding proteinChain: A: PDB Molecule: dna repair protein rad51;PDBTitle: rad51 (n-terminal domain)
63 d1b22a_
not modelled
97.5
15
Fold: SAM domain-likeSuperfamily: Rad51 N-terminal domain-likeFamily: DNA repair protein Rad51, N-terminal domain64 c1y98A_
not modelled
97.5
12
PDB header: antitumor proteinChain: A: PDB Molecule: breast cancer type 1 susceptibility protein;PDBTitle: structure of the brct repeats of brca1 bound to a ctip2 phosphopeptide.
65 c1l0bA_
not modelled
97.4
13
PDB header: unknown functionChain: A: PDB Molecule: brca1;PDBTitle: crystal structure of rat brca1 tandem-brct region
66 c2azmB_
not modelled
97.4
11
PDB header: cell cycleChain: B: PDB Molecule: mediator of dna damage checkpoint protein 1;PDBTitle: crystal structure of the mdc1 brct repeat in complex with2 the histone tail of gamma-h2ax
67 d1t15a1
not modelled
97.4
12
Fold: BRCT domainSuperfamily: BRCT domainFamily: BRCT domain68 c1ixrA_
not modelled
97.3
16
PDB header: hydrolaseChain: A: PDB Molecule: holliday junction dna helicase ruva;PDBTitle: ruva-ruvb complex
69 c2coeA_
not modelled
97.2
16
PDB header: transferaseChain: A: PDB Molecule: deoxynucleotidyltransferase, terminal variant;PDBTitle: solution structure of brct domain of terminal2 deoxynucleotidyltransferase
70 c1z56C_
not modelled
97.2
16
PDB header: ligaseChain: C: PDB Molecule: dna ligase iv;PDBTitle: co-crystal structure of lif1p-lig4p
71 c2w9mB_
not modelled
97.1
24
PDB header: dna replicationChain: B: PDB Molecule: polymerase x;PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans
72 c1hjpA_
not modelled
97.1
21
PDB header: dna recombinationChain: A: PDB Molecule: ruva;PDBTitle: holliday junction binding protein ruva from e. coli
73 c3kyhC_
not modelled
97.1
16
PDB header: protein bindingChain: C: PDB Molecule: mrna-capping enzyme subunit alpha;PDBTitle: saccharomyces cerevisiae cet1-ceg1 capping apparatus
74 c3s24F_
not modelled
97.0
16
PDB header: hydrolase, transferaseChain: F: PDB Molecule: mrna-capping enzyme;PDBTitle: crystal structure of human mrna guanylyltransferase
75 d1ckma2
not modelled
97.0
16
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: mRNA capping enzyme76 c2ihmA_
not modelled
97.0
22
PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase mu;PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide
77 c2jw5A_
not modelled
97.0
13
PDB header: protein bindingChain: A: PDB Molecule: dna polymerase lambda;PDBTitle: polymerase lambda brct domain
78 d1szpb1
not modelled
96.9
16
Fold: SAM domain-likeSuperfamily: Rad51 N-terminal domain-likeFamily: DNA repair protein Rad51, N-terminal domain79 c3t1nA_
not modelled
96.9
19
PDB header: cell cycle/peptideChain: A: PDB Molecule: microcephalin;PDBTitle: structure of human microcephalin (mcph1) tandem brct domains in2 complex with a cdc27 phosphopeptide
80 c2h5xA_
not modelled
96.9
18
PDB header: dna binding proteinChain: A: PDB Molecule: holliday junction atp-dependent dna helicase ruva;PDBTitle: ruva from mycobacterium tuberculosis
81 c1cknA_
not modelled
96.9
16
PDB header: capping enzymeChain: A: PDB Molecule: mrna capping enzyme;PDBTitle: structure of guanylylated mrna capping enzyme complexed2 with gtp
82 d1ixra1
not modelled
96.8
21
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: DNA helicase RuvA subunit, middle domain83 d1p16a2
not modelled
96.7
20
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: mRNA capping enzyme84 c2hvsA_
not modelled
96.7
17
PDB header: ligase/dna/rnaChain: A: PDB Molecule: t4 rna ligase 2;PDBTitle: structure of t4 rna ligase 2 with nicked 5'-adenylated2 nucleic acid duplex containing a 2'-deoxyribonucleotide at3 the nick
85 d1cuka2
not modelled
96.6
19
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: DNA helicase RuvA subunit, middle domain86 c1p16A_
not modelled
96.4
19
PDB header: transferaseChain: A: PDB Molecule: mrna capping enzyme alpha subunit;PDBTitle: structure of an mrna capping enzyme bound to the2 phosphorylated carboxyl-terminal domain of rna polymerase3 ii
87 c1d8lA_
not modelled
96.1
20
PDB header: gene regulationChain: A: PDB Molecule: protein (holliday junction dna helicase ruva);PDBTitle: e. coli holliday junction binding protein ruva nh2 region2 lacking domain iii
88 d1pu6a_
not modelled
95.9
17
Fold: DNA-glycosylaseSuperfamily: DNA-glycosylaseFamily: 3-Methyladenine DNA glycosylase III (MagIII)89 d1bvsa2
not modelled
95.8
26
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: DNA helicase RuvA subunit, middle domain90 c1kdhA_
not modelled
95.7
15
PDB header: transferase/dnaChain: A: PDB Molecule: terminal deoxynucleotidyltransferase shortPDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna
91 c2csdB_
not modelled
95.6
25
PDB header: isomeraseChain: B: PDB Molecule: topoisomerase v;PDBTitle: crystal structure of topoisomerase v (61 kda fragment)
92 c2ep8A_
not modelled
95.6
12
PDB header: cell cycleChain: A: PDB Molecule: pescadillo homolog 1;PDBTitle: solution structure of the brct domain from human pescadillo2 homolog 1
93 c2dunA_
not modelled
95.4
15
PDB header: transferaseChain: A: PDB Molecule: dna polymerase mu;PDBTitle: solution structure of brct domain of dna polymerase mu
94 d1lb2b_
not modelled
95.3
22
Fold: SAM domain-likeSuperfamily: C-terminal domain of RNA polymerase alpha subunitFamily: C-terminal domain of RNA polymerase alpha subunit95 d1doqa_
not modelled
95.2
24
Fold: SAM domain-likeSuperfamily: C-terminal domain of RNA polymerase alpha subunitFamily: C-terminal domain of RNA polymerase alpha subunit96 c8iczA_
not modelled
95.2
22
PDB header: transferase/dnaChain: A: PDB Molecule: protein (dna polymerase beta (e.c.2.7.7.7));PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar)
97 c2bcuA_
not modelled
95.2
16
PDB header: transferase, lyase/dnaChain: A: PDB Molecule: dna polymerase lambda;PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch
98 d1z3eb1
not modelled
95.0
19
Fold: SAM domain-likeSuperfamily: C-terminal domain of RNA polymerase alpha subunitFamily: C-terminal domain of RNA polymerase alpha subunit99 c2ziuA_
not modelled
94.9
14
PDB header: hydrolaseChain: A: PDB Molecule: mus81 protein;PDBTitle: crystal structure of the mus81-eme1 complex
100 d2p6ra2
not modelled
94.7
20
Fold: Sec63 N-terminal domain-likeSuperfamily: Sec63 N-terminal domain-likeFamily: Achaeal helicase C-terminal domain101 d1cooa_
not modelled
94.6
21
Fold: SAM domain-likeSuperfamily: C-terminal domain of RNA polymerase alpha subunitFamily: C-terminal domain of RNA polymerase alpha subunit102 d1kzyc2
not modelled
94.5
24
Fold: BRCT domainSuperfamily: BRCT domainFamily: 53BP1103 d1l0ba2
not modelled
94.5
21
Fold: BRCT domainSuperfamily: BRCT domainFamily: BRCT domain104 d2a1ja1
not modelled
94.3
22
Fold: SAM domain-likeSuperfamily: RuvA domain 2-likeFamily: Hef domain-like105 c3f10A_
not modelled
94.2
30
PDB header: hydrolase, lyaseChain: A: PDB Molecule: 8-oxoguanine-dna-glycosylase;PDBTitle: crystal structure of clostridium acetobutylicum 8-2 oxoguanine dna glycosylase in complex with 8-oxoguanosine
106 d1s68a_
not modelled
93.9
20
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: RNA ligase107 c1s5lu_
not modelled
93.6
10
PDB header: photosynthesisChain: U: PDB Molecule: photosystem ii 12 kda extrinsic protein;PDBTitle: architecture of the photosynthetic oxygen evolving center
108 c2va8A_
not modelled
93.2
18
PDB header: hydrolaseChain: A: PDB Molecule: ski2-type helicase;PDBTitle: dna repair helicase hel308
109 d2axtu1
not modelled
92.8
10
Fold: SAM domain-likeSuperfamily: PsbU/PolX domain-likeFamily: PsbU-like110 c2p6uA_
not modelled
92.7
15
PDB header: dna binding proteinChain: A: PDB Molecule: afuhel308 helicase;PDBTitle: apo structure of the hel308 superfamily 2 helicase
111 d2noha1
not modelled
92.3
29
Fold: DNA-glycosylaseSuperfamily: DNA-glycosylaseFamily: DNA repair glycosylase, 2 C-terminal domains112 d1keaa_
not modelled
92.3
21
Fold: DNA-glycosylaseSuperfamily: DNA-glycosylaseFamily: Mismatch glycosylase113 d1kg2a_
not modelled
92.1
31
Fold: DNA-glycosylaseSuperfamily: DNA-glycosylaseFamily: Mismatch glycosylase114 d1in1a_
not modelled
91.7
11
Fold: BRCT domainSuperfamily: BRCT domainFamily: DNA ligase115 c1ut8B_
not modelled
91.5
15
PDB header: hydrolaseChain: B: PDB Molecule: exodeoxyribonuclease;PDBTitle: divalent metal ions (zinc) bound to t5 5'-exonuclease
116 d1xo1a1
not modelled
91.3
15
Fold: SAM domain-likeSuperfamily: 5' to 3' exonuclease, C-terminal subdomainFamily: 5' to 3' exonuclease, C-terminal subdomain117 c3n5nX_
not modelled
91.0
40
PDB header: hydrolaseChain: X: PDB Molecule: a/g-specific adenine dna glycosylase;PDBTitle: crystal structure analysis of the catalytic domain and interdomain2 connector of human muty homologue
118 d1ul1x1
not modelled
91.0
23
Fold: SAM domain-likeSuperfamily: 5' to 3' exonuclease, C-terminal subdomainFamily: 5' to 3' exonuclease, C-terminal subdomain119 d1rrqa1
not modelled
90.9
33
Fold: DNA-glycosylaseSuperfamily: DNA-glycosylaseFamily: Mismatch glycosylase120 d2abka_
not modelled
90.9
24
Fold: DNA-glycosylaseSuperfamily: DNA-glycosylaseFamily: Endonuclease III
