PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3l40A_

Fold library id	PDB Header	Molecule	Title
c3l40A_	PDB header: cell cycle	Chain: A: PDB Molecule: brct-containing protein 1;	PDBTitle: crystal structure of s. pombe brc1 brct5-brct6 domains

Links to external resources
Added to library: Sat Aug 28 15:40:10 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T N A K A S K R V Y I T F T G Y D K K P S I D N L K K L D M S I T S N P S K C T H L I A P R I L R T S K F L C S I P Y G P C V V T M D W I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T
S
T T T
S
S S
S G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S C L K T H E I V D E E P Y L L N D P E K E L E L G C T L E S A L K R A R A Q G P S L L E D Y V V Y L T S K T V A P E N V P A V I S I V K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S G G G B
T S
S
T T T T
T T S S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N G G V C S T L N V Y N K R L A R H L E D G N V V L I T C N E D S H I W T N F L D N A S Q N K T I F L Q N Y D W L I K T V L R Q E I D V N D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G G G
T T
T
T T

. . . . . . . .

Sequence R I A D E F A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	N	A	K	A	S	K	R	V	Y	I	T	F	T	G	Y	D	K	K	P	S	I	D	N	L	K	K	L	D	M	S	I	T	S	N	P	S	K	C	T	H	L	I	A	P	R	I	L	R	T	S	K	F	L	C	S	I	P	Y	G	P	C	V	V	T	M	D	W	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S		S	S										T	T					S		T	T	T		S					S	S				S							G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	C	L	K	T	H	E	I	V	D	E	E	P	Y	L	L	N	D	P	E	K	E	L	E	L	G	C	T	L	E	S	A	L	K	R	A	R	A	Q	G	P	S	L	L	E	D	Y	V	V	Y	L	T	S	K	T	V	A	P	E	N	V	P	A	V	I	S	I	V	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S				S	G	G	G	B											T	S														S		T	T	T	T							T	T	S	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	G	G	V	C	S	T	L	N	V	Y	N	K	R	L	A	R	H	L	E	D	G	N	V	V	L	I	T	C	N	E	D	S	H	I	W	T	N	F	L	D	N	A	S	Q	N	K	T	I	F	L	Q	N	Y	D	W	L	I	K	T	V	L	R	Q	E	I	D	V	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																												G	G	G					G	G	G								T	T																T				T	T
	.	.	.	.	.	.	.	.
Sequence	R	I	A	D	E	F	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B