Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1dgsa3

Fold library idFoldSuperfamilyFamily
d1dgsa3ATP-graspDNA ligase/mRNA capping enzyme, catalytic domainAdenylation domain of NAD+-dependent DNA ligase


Added to library: Tue Mar 16 13:33:52 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTREEARRRINELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPEFKSPDSPTEQVGARPLE
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)

TT



S
SSSSTTSSGGG

TTSGGGG
SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence PTFRPVRHPTRMYSLDNAFTYEEVLAFEERLEREAEAPSLYTVEHKVDGLSVLYYEEGVWSTGSGDGEVG
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)




SS






STTSSS
S



S
TT
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EEVTQNLLTIPTIPRRLKGVPDRLEVRGEVYMPIEAFLRLNEELEERGEKVFKNPRNAAAGSLRQKDPRV
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) B
TGGGTSSTTS
SB
SS

S

T



SSS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TAKRGLRATFYALGLGLGLEESGLKSQYELLLWLKEKGFPVEHCYEKALGAEGVEEVYRRGLAQRHALPF
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) S




B
TTTTTTS



BTT



S
TTTTSSS
 .........290.........300.........310....
Sequence EADGVVLKLDDLTLWGELGYTARAPRFALAYKFP
Predicted secondary structure

















SS confidence

































Known secondary structure (DSSP)


SBTS
B
SS
BSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D