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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1zauA_

Fold library idPDB HeaderMoleculeTitle
c1zauA_PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: adenylation domain of nad+ dependent dna ligase from2 m.tuberculosis


Added to library: Tue Mar 16 13:46:26 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QTAPEVLRQWQALAEEVREHQFRYYVRDAPIISDAEFDELLRRLEALEEQHPELRTPDSPTQLVGGAGFA
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Known secondary structure (DSSP)

TTTTT


SS
TTSSTT

TT
TTTT
SS



 .........80.........90.........100.........110.........120.........130.........140
Sequence TDFEPVDHLERMLSLDNAFTADELAAWAGRIHAEVGDAAHYLCELKIDGVALSLVYREGRLTRASTRGDG
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Known secondary structure (DSSP)





SS






BSSGGGTTT
S
S

S
GGGB

B
BB
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RTGEDVTLNARTIADVPERLTPGDDYPVPEVLEVRGEVFFRLDDFQALNASLVEEGKAPFANPRNSAAGS
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Known secondary structure (DSSP) S
B
SSS

SB


BTTB


S

B

S
SSTTS


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRQKDPAVTARRRLRMICHGLGHVEGFRPATLHQAYLALRAWGLPVSEHTTLATDLAGVRERIDYWGEHR
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Known secondary structure (DSSP) T
SSS

B



B



SS


SBTTT








B
TTTT
 .........290.........300.........310.........320.
Sequence HEVDHEIDGVVVKVDEVALQRRLGSTSRAPRWAIAYKYPPE
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Known secondary structure (DSSP) SS
SS

BTTS
B
SSSBSS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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