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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3pn1A_

Fold library idPDB HeaderMoleculeTitle
c3pn1A_PDB header: ligase/ligase inhibitorChain: A: PDB Molecule: dna ligase;PDBTitle: novel bacterial nad+-dependent dna ligase inhibitors with broad2 spectrum potency and antibacterial efficacy in vivo


Added to library: Sat Jan 15 11:35:22 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTNIQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQLKALELEHPEFLTSDSPTQRVGAKPLSGF
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Known secondary structure (DSSP)

TTS

SS
SGGG

TTSGGG
S
SS

S

 .........80.........90.........100.........110.........120.........130.........140
Sequence SQIRHEIPMLSLDNAFSDAEFNAFVKRIEDRLILLPKPLTFCCEPKLDGLAVSILYVNGELTQAATRGDG
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Known secondary structure (DSSP)

SS






S
SS

SS

STT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TTGEDITANIRTIRNVPLQLLTDNPPARLEVRGEVFMPHAGFERLNKYALEHNEKTFANPRNAAAGSLRQ
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Known secondary structure (DSSP) SB
T
TTS
SB
SSSS

S

TTT



SST
 .........220.........230.........240.........250.........260.........270.........280
Sequence LDPNITSKRPLVLNAYGIGIAEGVDLPTTHYARLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSS
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Known secondary structure (DSSP) S
TTS

SS


SBTT

B
TT
GGG
 .........290.........300.........310........
Sequence LGYDIDGTVLKINDIALQNELGFISKAPRWAIAYKFPA
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Known secondary structure (DSSP) SSS
SB
TTSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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